RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SHHQ15465 462 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 DEFB108BQ8NET1 73 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 HES4Q9HCC6 221 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 PITPNC1Q9UKF7 332 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 MON2Q7Z3U7 1717 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 C3orf85A0A1B0GTC6 90 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 IFITM10A6NMD0 228 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 ICOSLGO75144 302 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 LGALSLQ3ZCW2 172 aaPredicted RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 SPINK9Q5DT21 86 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 FBXL6Q8N531 539 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 OR11H7Q8NGC8 314 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 DUSP23Q9BVJ7 150 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 SLC45A2Q9UMX9 530 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 CYC1P08574 325 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 PGA3P0DJD8 388 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 CXCL3P19876 107 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 NPY1RP25929 384 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 CD38P28907 300 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 FGF9P31371 208 aaPredicted RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 PPIAP62937 165 aaKnown RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 ZNF385CQ66K41 422 aaPredicted RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 ABI3BPQ7Z7G0 1075 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 MRGPREQ86SM8 312 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 EIF4E3Q8N5X7 224 aaKnown RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 ZNF738Q8NE65 137 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 RAB24Q969Q5 203 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 GALMQ96C23 342 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 ARHGAP5-AS1Q96IT6 56 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 RAB40CQ96S21 281 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 NTMQ9P121 344 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 NALCNQ8IZF0 1738 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 A0A096LPE4 126 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 A0A1W2PPZ6 126 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 ANKRD20A5PA0PJZ0 165 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 DSCR3O14972 297 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 IGHEP01854 428 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 FAHP16930 419 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 ZNF628Q5EBL2 1059 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 OR2C3Q8N628 320 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 TP53I13Q8NBR0 393 aaPredicted RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 C11orf40Q8WZ69 217 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 FOXQ1Q9C009 403 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 SLC17A5Q9NRA2 495 aa8.81□□□□□ -1
COL4A6-201ENST00000334504 GOLGA4Q13439 2230 aaKnown RBP8.81□□□□□ -1
COL4A6-201ENST00000334504 FIGNL2A6NMB9 653 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 CTAG2O75638 210 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 RBP4P02753 201 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 PDCD1Q15116 288 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 NUFIP2Q7Z417 695 aaKnown RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 LINC00518Q8N0U6 118 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 MOB3AQ96BX8 217 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ANGPTL4Q9BY76 406 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ZNF576Q9H609 170 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 IL20Q9NYY1 176 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 PRR13Q9NZ81 148 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 CACFD1Q9UGQ2 172 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 DAPP1Q9UN19 280 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 HS3ST2Q9Y278 367 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 LRP12Q9Y561 859 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 IGHV3-15A0A0B4J1V0 119 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 B4DEV8 164 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 F5H697 171 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 PCMT1P22061 227 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 PTGFRP43088 359 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 TNFRSF4P43489 277 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 PLP1P60201 277 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ATP6V1FQ16864 119 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 HLA-BQ31612 363 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 YRDCQ86U90 279 aaKnown RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 ADPRHL1Q8NDY3 354 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 OR10G8Q8NGN5 311 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 B9D1Q9UPM9 204 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 MBLAC1A4D2B0 266 aaPredicted RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 DIRC3C9JPN6 131 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 CBR3O75828 277 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 IRS1P35568 1242 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 PPP2CAP67775 309 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 DCAF12Q5T6F0 453 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 TMEM65Q6PI78 240 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ZNF547Q8IVP9 402 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 OR10V1Q8NGI7 309 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 KIR3DX1Q9H7L2 352 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ZMIZ1Q9ULJ6 1067 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 CCDC88AQ3V6T2 1871 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 TRBV23-1A0A0A0MS06 115 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 FXYD1O00168 92 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 NRG2O14511 850 aaPredicted RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 PLRG1O43660 514 aaKnown RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 FGF17O60258 216 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ALOX12BO75342 701 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 THBS4P35443 961 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 ARR3P36575 388 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 TCTAP57738 103 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 TRMT61AQ96FX7 289 aaKnown RBP8.8□□□□□ -1
COL4A6-201ENST00000334504 OR2D2Q9H210 308 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 BCL2L10Q9HD36 194 aa8.8□□□□□ -1
COL4A6-201ENST00000334504 MANBALQ9NQG1 85 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms