RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 DHRS7CA6NNS2 312 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 SYNGR3O43761 229 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 MTRF1O75570 445 aaKnown RBP16.5■□□□□ 0.23
RFTN1-201ENST00000334133 SERPINA5P05154 406 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 PGAM2P15259 253 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 PSG4Q00888 419 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 CHRFAM7AQ494W8 412 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 FAM89BQ8N5H3 189 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 OR1F12Q8NHA8 337 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 PP6455Q8WZ26 134 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 DCUN1D4Q92564 292 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 DHRS9Q9BPW9 319 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 PLA2G3Q9NZ20 509 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 FOXJ2Q9P0K8 574 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 HOXB5P09067 269 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 CCL2P13500 99 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 CCNOP22674 350 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 LPCAT3Q6P1A2 487 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 PSMF1Q92530 271 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 GSKIPQ9P0R6 139 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 LRFN1Q9P244 771 aa16.5■□□□□ 0.23
RFTN1-201ENST00000334133 NUPL2O15504 423 aaKnown RBP16.49■□□□□ 0.23
RFTN1-201ENST00000334133 UBBP0CG47 229 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 CRYGSP22914 178 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 NUP62P37198 522 aaPredicted RBP16.49■□□□□ 0.23
RFTN1-201ENST00000334133 VAX1Q5SQQ9 334 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 MARVELD3Q96A59 401 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 FOXB1Q99853 325 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 PPA2Q9H2U2 334 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 A0A096LPE4 126 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 A0A0D9SG52 128 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 A0A1W2PPZ6 126 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 TBPP20226 339 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 ZNF133P52736 654 aaPredicted RBP16.49■□□□□ 0.23
RFTN1-201ENST00000334133 SLC16A14Q7RTX9 510 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 SKA3Q8IX90 412 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 INO80EQ8NBZ0 244 aaPredicted RBP16.49■□□□□ 0.23
RFTN1-201ENST00000334133 OR2V1Q8NHB1 315 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 NTNG2Q96CW9 530 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 RRNAD1Q96FB5 475 aaKnown RBP16.49■□□□□ 0.23
RFTN1-201ENST00000334133 SIGLEC12Q96PQ1 595 aa16.49■□□□□ 0.23
RFTN1-201ENST00000334133 NUDT16L1Q9BRJ7 211 aaKnown RBP16.49■□□□□ 0.23
RFTN1-201ENST00000334133 FAM166BA8MTA8 275 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 MSTNO14793 375 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 CRHP06850 196 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 GLI4P10075 376 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 NAT1P18440 290 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 MPLP40238 635 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 PNLIPRP3Q17RR3 467 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 PIGYQ3MUY2 71 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 LINC00696Q6ZRV3 163 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 ACOT7LQ6ZUV0 252 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 ARRDC1Q8N5I2 433 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 CDC6Q99741 560 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 METTL8Q9H825 291 aaKnown RBP16.48■□□□□ 0.23
RFTN1-201ENST00000334133 FOXI3A8MTJ6 420 aaPredicted RBP16.48■□□□□ 0.23
RFTN1-201ENST00000334133 H0YIZ8 118 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 BCL2L11O43521 198 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 CSTBP04080 98 aaKnown RBP16.48■□□□□ 0.23
RFTN1-201ENST00000334133 CPT2P23786 658 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 PSMB6P28072 239 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 BTN1A1Q13410 526 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 RAB35Q15286 201 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 RSU1Q15404 277 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 PXDC1Q5TGL8 231 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 GLRX5Q86SX6 157 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 OR10C1Q96KK4 312 aa16.48■□□□□ 0.23
RFTN1-201ENST00000334133 A0A0B4J2A0 478 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 A0A1W2PNU3 283 aaPredicted RBP16.47■□□□□ 0.23
RFTN1-201ENST00000334133 TUBAL3A6NHL2 446 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 C9orf172C9J069 976 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 ZNF92Q03936 586 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 CDCP2Q5VXM1 449 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 TMEM200AQ86VY9 491 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 SHPKQ9UHJ6 478 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 DBX1A6NMT0 343 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 B4E171 279 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 SLC25A4P12235 298 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 CALCRP30988 508 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 TSPAN7P41732 249 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 FOXG1P55316 489 aaPredicted RBP16.47■□□□□ 0.23
RFTN1-201ENST00000334133 DRAM2Q6UX65 266 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 PXT1Q8NFP0 134 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 OR52H1Q8NGJ2 320 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 OR51F2Q8NH61 342 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 NUP50Q9UKX7 468 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 ANAPC10Q9UM13 185 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 SHANK1Q9Y566 2161 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 LNP1A1A4G5 178 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 MSGN1A6NI15 193 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 ZNF587BE7ETH6 402 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 OR2F2O95006 317 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 SFT2D2O95562 160 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 HPP00738 406 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 ACP1P24666 158 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 SRSF4Q08170 494 aaKnown RBP16.47■□□□□ 0.23
RFTN1-201ENST00000334133 RIPPLY1Q0D2K3 151 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 OR2F1Q13607 317 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 TSPO2Q5TGU0 170 aa16.47■□□□□ 0.23
RFTN1-201ENST00000334133 OR5AP2Q8NGF4 316 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms