RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 DUSP13Q9UII6 198 aa9.38□□□□□ -0.91
SPTBN1-201ENST00000333896 C7orf66A4D0T2 115 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 BCAT2O15382 392 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 GALR2O43603 387 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 CHST6Q9GZX3 395 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 SPATA6Q9NWH7 488 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 ALOX5APP20292 161 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 ARF6P62330 175 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 RAB40CQ96S21 281 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 PRRX1P54821 245 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 ELAVL1Q15717 326 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 MRPL2Q5T653 305 aaKnown RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 CBARPQ8N350 705 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 VN1R17PQ8TDU5 208 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 SGK494Q96LW2 274 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 MTFP1Q9UDX5 166 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 NPIPB15A6NHN6 443 aaPredicted RBP9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 ZNF716A6NP11 495 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 LMX1BO60663 402 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 FGF18O76093 207 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 HOXA6P31267 233 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 RBPJQ06330 500 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 FCRL6Q6DN72 434 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 DCBLD2Q96PD2 775 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 TBC1D28Q2M2D7 210 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 LINC00346Q8IVM7 164 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 OR1P1Q8NH06 330 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 TEAD3Q99594 435 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 OR1D4P47884 311 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 DLX1P56177 255 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 BHLHE23Q8NDY6 225 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 SUSD3Q96L08 255 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 V9GYH0 126 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 TRBV9A0A0B4J1U6 114 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 LYZL6O75951 148 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 GLULP15104 373 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 OLIG1Q8TAK6 271 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 CALHM2Q9HA72 323 aa9.37□□□□□ -0.91
SPTBN1-201ENST00000333896 SSC5DA1L4H1 1573 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 DCTDP32321 178 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 MUC20Q8N307 709 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 TMEM251Q8N6I4 163 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PIGTQ969N2 578 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 CER1O95813 267 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ATF1P18846 271 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 KLF3P57682 345 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 FKBP1BP68106 108 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ZNF77Q15935 545 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PLPPR5Q32ZL2 321 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 LY6G5CQ5SRR4 150 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 VASH2Q86V25 355 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 TBX21Q9UL17 535 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 FREM1Q5H8C1 2179 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 HCFC1P51610 2035 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ZNF737O75373 536 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 LIPFP07098 398 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 SLC19A1P41440 591 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 LSM11P83369 360 aaKnown RBP eCLIP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ZNF140P52738 457 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PMP22Q01453 160 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PRRX2Q99811 253 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ZFP30Q9Y2G7 519 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PLXNB1O43157 2135 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PLPP2O43688 288 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 CD3DP04234 171 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 CYC1P08574 325 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 NMBP08949 121 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 NHLRC3Q5JS37 347 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 GLIPR1L1Q6UWM5 242 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 OR1N2Q8NGR9 330 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 TMEM140Q9NV12 185 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 PCBP3P57721 371 aaKnown RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 SPNS3Q6ZMD2 512 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 GLCCI1Q86VQ1 547 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 OR5AS1Q8N127 324 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ORAI1Q96D31 301 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 ASCL3Q9NQ33 180 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 VAX2Q9UIW0 290 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 KCNK7Q9Y2U2 307 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 MYADML2A6NDP7 307 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 SLC10A3P09131 477 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 POU2AF1Q16633 256 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 SOWAHCQ53LP3 525 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 BOKQ9UMX3 212 aaPredicted RBP9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 OR51B4Q9Y5P0 310 aa9.36□□□□□ -0.91
SPTBN1-201ENST00000333896 TRAV36DV7A0A075B6V5 113 aa9.35□□□□□ -0.91
SPTBN1-201ENST00000333896 RPS16P62249 146 aaKnown RBP9.35□□□□□ -0.91
SPTBN1-201ENST00000333896 PRSS50Q9UI38 385 aa9.35□□□□□ -0.91
SPTBN1-201ENST00000333896 FOXJ3Q9UPW0 622 aa9.35□□□□□ -0.91
SPTBN1-201ENST00000333896 TICRRQ7Z2Z1 1910 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms