RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SPTBN2O15020 2390 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 A0A1W2PR80 420 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 HTR3BO95264 441 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 PDZK1IP1Q13113 114 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 RPUSD3Q6P087 351 aaKnown RBP14.62□□□□□ -0.07
DDX41-201ENST00000330503 SEM1Q6ZVN7 128 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 MRPL21Q7Z2W9 205 aaKnown RBP14.62□□□□□ -0.07
DDX41-201ENST00000330503 BPIFB2Q8N4F0 458 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 SLC30A7Q8NEW0 376 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 OR6K3Q8NGY3 331 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 ST8SIA4Q92187 359 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 SNAPC3Q92966 411 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 TECTBQ96PL2 329 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 OCSTAMPQ9BR26 566 aa14.62□□□□□ -0.07
DDX41-201ENST00000330503 SSNA1O43805 119 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 CNOT4O95628 575 aaKnown RBP14.61□□□□□ -0.07
DDX41-201ENST00000330503 C1QBP02746 253 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 CELA3BP08861 270 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 TGFBR3Q03167 851 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 RSU1Q15404 277 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 TSC22D1Q15714 1073 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 IDO2Q6ZQW0 420 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 CPNE2Q96FN4 548 aaPredicted RBP14.61□□□□□ -0.07
DDX41-201ENST00000330503 IFT46Q9NQC8 304 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 PLSCR4Q9NRQ2 329 aa14.61□□□□□ -0.07
DDX41-201ENST00000330503 ZNF629Q9UEG4 869 aaPredicted RBP14.61□□□□□ -0.07
DDX41-201ENST00000330503 TNFSF13O75888 250 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 CST4P01036 141 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 RLN1P04808 185 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 GZMKP49863 264 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 PRDX4Q13162 271 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 MEF2DQ14814 521 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 NKPD1Q17RQ9 610 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 SIGIRRQ6IA17 410 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 RTL6Q6ICC9 239 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 OR2A2Q6IF42 318 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 RFPL4BQ6ZWI9 263 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 CD163Q86VB7 1156 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 CALHM1Q8IU99 346 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 SPACA3Q8IXA5 215 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 OR52B4Q8NGK2 314 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 OR13C8Q8NGS7 320 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 FBXW5Q969U6 566 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 ZNF581Q9P0T4 197 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 LUZP4Q9P127 313 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 ZNF222Q9UK12 451 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 MEIKINA0A087WXM9 373 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 GFRA3O60609 400 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 CSN2P05814 226 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 TPOP07202 933 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 CPT2P23786 658 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 MPZP25189 248 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 IFITM2Q01629 132 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 GTF3C1Q12789 2109 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 CCDC36Q8IYA8 594 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 PXT1Q8NFP0 134 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 STARD4Q96DR4 205 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 BOLA1Q9Y3E2 137 aa14.6□□□□□ -0.07
DDX41-201ENST00000330503 PQLC2LA1A4F0 135 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 CD300LBA8K4G0 201 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 SNRPGP15A8MWD9 76 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 DISC1C4P0D8 188 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 FABP7O15540 132 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 CGAP01215 116 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 COX5AP20674 150 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 HRH1P35367 487 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 EIF2S3P41091 472 aaKnown RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 UBE2NP61088 152 aaKnown RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 RNASE10Q5GAN6 216 aaKnown RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 ZNF626Q68DY1 528 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 WDR31Q8NA23 367 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 HPSE2Q8WWQ2 592 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 MRGPRFQ96AM1 343 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 BOD1Q96IK1 185 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 GPR137Q96N19 417 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 SLC25A21Q9BQT8 299 aaPredicted RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 PAPOLGQ9BWT3 736 aaKnown RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 OR51B6Q9H340 312 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 SLC2A8Q9NY64 477 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 IL36GQ9NZH8 169 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 EIF3KQ9UBQ5 218 aaKnown RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 SCP2D1Q9UJQ7 156 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 MGAQ8IWI9 3026 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 LILRA1O75019 489 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 TOXO94900 526 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 PMP2P02689 132 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 CSTBP04080 98 aaKnown RBP14.59□□□□□ -0.07
DDX41-201ENST00000330503 SFTPBP07988 381 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 GABRR1P24046 479 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 CXADRP78310 365 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 C6orf201Q7Z4U5 140 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 NAXEQ8NCW5 288 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 CSNK2A3Q8NEV1 391 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 ABHD17AQ96GS6 310 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 OPA3Q9H6K4 179 aa14.59□□□□□ -0.07
DDX41-201ENST00000330503 MBD3L4A6NDZ8 208 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 MBD3L3A6NE82 208 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 MBD3L5A6NJ08 208 aaPredicted RBP14.58□□□□□ -0.08
DDX41-201ENST00000330503 MKRN2OSH3BPM6 223 aa14.58□□□□□ -0.08
DDX41-201ENST00000330503 ARFRP1Q13795 201 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms