RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PHYHD1Q5SRE7 291 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 OR10Z1Q8NGY1 313 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 TLNRD1Q9H1K6 362 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 ZNF701Q9NV72 531 aaPredicted RBP13.46□□□□□ -0.25
BRCC3-201ENST00000330045 NDRG3Q9UGV2 375 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 C14orf166Q9Y224 244 aaKnown RBP13.46□□□□□ -0.25
BRCC3-201ENST00000330045 MEMO1Q9Y316 297 aa13.46□□□□□ -0.25
BRCC3-201ENST00000330045 NCOA6Q14686 2063 aaPredicted RBP13.46□□□□□ -0.26
BRCC3-201ENST00000330045 IGHV5-10-1A0A0J9YXX1 117 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 H7C2Y5 167 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 PNLIPP16233 465 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 PJVKQ0ZLH3 352 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 C10orf128Q5T292 105 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 H3F3CQ6NXT2 135 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 GALNTL5Q7Z4T8 443 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 PPP1R3BQ86XI6 285 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 LRRC18Q8N456 261 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 ADAMTS17Q8TE56 1095 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 HAS2Q92819 552 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 CHST5Q9GZS9 411 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 TMEM231Q9H6L2 316 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 AKIRIN1Q9H9L7 192 aaPredicted RBP13.46□□□□□ -0.26
BRCC3-201ENST00000330045 PIGLQ9Y2B2 252 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 PRELID3BQ9Y3B1 194 aa13.46□□□□□ -0.26
BRCC3-201ENST00000330045 SFTPBP07988 381 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 RSPO1Q2MKA7 263 aaPredicted RBP13.45□□□□□ -0.26
BRCC3-201ENST00000330045 TCEAL6Q6IPX3 200 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 SPAG16Q8N0X2 631 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 TCEAL3Q969E4 200 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 TMEM54Q969K7 222 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 PIGTQ969N2 578 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 HRH4Q9H3N8 390 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 ACKR4Q9NPB9 350 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 C1orf123Q9NWV4 160 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 PMS2P1A4D2B8 440 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 CA11O75493 328 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 IFNA2P01563 188 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 PTGER4P35408 488 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 EIF5AP63241 154 aaKnown RBP13.45□□□□□ -0.26
BRCC3-201ENST00000330045 PPA1Q15181 289 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 RTL6Q6ICC9 239 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 SAT2Q96F10 170 aaPredicted RBP13.45□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF385AQ96PM9 386 aaKnown RBP13.45□□□□□ -0.26
BRCC3-201ENST00000330045 UQCC1Q9NVA1 299 aa13.45□□□□□ -0.26
BRCC3-201ENST00000330045 IGKV1D-8A0A087WSZ0 117 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 IGHV3-15A0A0B4J1V0 119 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 TAAR5O14804 337 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 MTRF1O75570 445 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 RBMXP38159 391 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 C6orf201Q7Z4U5 140 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 FOXRED2Q8IWF2 684 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 SMIM8Q96KF7 97 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 CCDC74BQ96LY2 380 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 RBM24Q9BX46 236 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 SEC11CQ9BY50 192 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 PLEKHJ1Q9NW61 149 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 MCTS1Q9ULC4 181 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 A0A087WZY1 265 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 NPIPA2E9PIF3 369 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 NPIPA3F8WFD2 350 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 M0R135 149 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 SNAPINO95295 136 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 GABRR1P24046 479 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 ECI1P42126 302 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF84P51523 738 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 RBM39Q14498 530 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 HFEQ30201 348 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 RPL7L1Q6DKI1 246 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 DHRS7BQ6IAN0 325 aaPredicted RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 EIF5AL1Q6IS14 154 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 MRPL14Q6P1L8 145 aaKnown RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 Q6ZSR3 168 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 FOXL2NBQ6ZUU3 175 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 CBLN2Q8IUK8 224 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 SEMA6DQ8NFY4 1073 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 C10orf35Q96D05 121 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF799Q96GE5 643 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 PIGQQ9BRB3 760 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF2Q9BSG1 426 aaPredicted RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 IER2Q9BTL4 223 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 SAV1Q9H4B6 383 aaPredicted RBP13.44□□□□□ -0.26
BRCC3-201ENST00000330045 TAF9BQ9HBM6 251 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 PCDHGA1Q9Y5H4 931 aa13.44□□□□□ -0.26
BRCC3-201ENST00000330045 DHRS7CA6NNS2 312 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 DHHO43323 396 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 F12P00748 615 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-201ENST00000330045 SERPINA5P05154 406 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 DBHP09172 617 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 HKR1P10072 659 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 PVALBP20472 110 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-201ENST00000330045 OTX1P32242 354 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-201ENST00000330045 ZNF133P52736 654 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-201ENST00000330045 HIST1H3AP68431 136 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 IAH1Q2TAA2 248 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-201ENST00000330045 TRIM61Q5EBN2 209 aa13.43□□□□□ -0.26
BRCC3-201ENST00000330045 HIST2H3PS2Q5TEC6 136 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms