RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SNAPC1Q16533 368 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 FAM76BQ5HYJ3 339 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 LCN1P1Q5VSP4 162 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 ASPHD2Q6ICH7 369 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 FAHD1Q6P587 224 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 HAGHLQ6PII5 290 aaPredicted RBP10.09□□□□□ -0.79
TPM3-204ENST00000323144 AQP3Q92482 292 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 DUS3LQ96G46 650 aaKnown RBP10.09□□□□□ -0.79
TPM3-204ENST00000323144 CNN2Q99439 309 aaKnown RBP10.09□□□□□ -0.79
TPM3-204ENST00000323144 RBM4BQ9BQ04 359 aaKnown RBP10.09□□□□□ -0.79
TPM3-204ENST00000323144 YIPF3Q9GZM5 350 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 PAPOLBQ9NRJ5 636 aaKnown RBP10.09□□□□□ -0.79
TPM3-204ENST00000323144 DNAJB9Q9UBS3 223 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 NUFIP1Q9UHK0 495 aaKnown RBP10.09□□□□□ -0.79
TPM3-204ENST00000323144 IKZF2Q9UKS7 526 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 GTF2A1LQ9UNN4 478 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 POMPQ9Y244 141 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 FAM96BQ9Y3D0 163 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 MAB21L2Q9Y586 359 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 TGP01266 2768 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 NOTCH1P46531 2555 aa10.09□□□□□ -0.79
TPM3-204ENST00000323144 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 TMEM269A0A1B0GVZ9 245 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 OR5B21A6NL26 309 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 M0R1W7 72 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 ANGPTL7O43827 346 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 CLPXO76031 633 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 ACAA1P09110 424 aaPredicted RBP10.08□□□□□ -0.8
TPM3-204ENST00000323144 ANXA8P13928 327 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 EPHA2P29317 976 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 MAP2K3P46734 347 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 DAPP51397 102 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 BMXP51813 675 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 ROM1Q03395 351 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 EGR3Q06889 387 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 ZNF829Q3KNS6 432 aaPredicted RBP10.08□□□□□ -0.8
TPM3-204ENST00000323144 GDPGP1Q6ZNW5 385 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 MOB3CQ70IA8 216 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 SSX6Q7RTT6 188 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 CD177Q8N6Q3 437 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 ZSCAN4Q8NAM6 433 aaPredicted RBP10.08□□□□□ -0.8
TPM3-204ENST00000323144 POC1AQ8NBT0 407 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 LRTOMTQ8WZ04 291 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 RORBQ92753 470 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 SLC7A6OSQ96CW6 309 aaPredicted RBP10.08□□□□□ -0.8
TPM3-204ENST00000323144 AJUBAQ96IF1 538 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 DPAGT1Q9H3H5 408 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 ADGRL4Q9HBW9 690 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 GPR173Q9NS66 373 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 PIGLQ9Y2B2 252 aa10.08□□□□□ -0.8
TPM3-204ENST00000323144 MEGF11A6BM72 1044 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 BTBD17A6NE02 478 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 LOC110117498-PIK3R3F6TDL0 507 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 H3BSH0 61 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 H3BUX3 64 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 J3QT63 122 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 M0QZ24 198 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 GPR37O15354 613 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 GYG2O15488 501 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 DHRS3O75911 302 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 APOL3O95236 402 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 PAHP00439 452 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 CCL3L1P16619 93 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 EEF1B2P24534 225 aaKnown RBP10.07□□□□□ -0.8
TPM3-204ENST00000323144 RIDAP52758 137 aaKnown RBP10.07□□□□□ -0.8
TPM3-204ENST00000323144 CAPZA1P52907 286 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 CRISP1P54107 249 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 ZNF273Q14593 569 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 CEACAM21Q3KPI0 293 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 DNAL1Q4LDG9 190 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 NCR3LG1Q68D85 454 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 KCTD18Q6PI47 426 aaPredicted RBP10.07□□□□□ -0.8
TPM3-204ENST00000323144 ACP7Q6ZNF0 438 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 KRT74Q7RTS7 529 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 THAP5Q7Z6K1 395 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 C1QL4Q86Z23 238 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 SLC35F2Q8IXU6 374 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 ZNF679Q8IYX0 411 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 PAPD5Q8NDF8 572 aaKnown RBP10.07□□□□□ -0.8
TPM3-204ENST00000323144 UTP4Q969X6 686 aaKnown RBP10.07□□□□□ -0.8
TPM3-204ENST00000323144 APOL4Q9BPW4 351 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 MMP27Q9H306 513 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 METTL8Q9H825 291 aaKnown RBP10.07□□□□□ -0.8
TPM3-204ENST00000323144 TCF7L1Q9HCS4 588 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 SIGLEC9Q9Y336 463 aa10.07□□□□□ -0.8
TPM3-204ENST00000323144 TRBV23-1A0A0A0MS06 115 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 MEX3AA1L020 520 aaKnown RBP10.06□□□□□ -0.8
TPM3-204ENST00000323144 A6NIN4 97 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 SLC22A31A6NKX4 558 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 TIMM23O14925 209 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 CHST1O43916 411 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 MTRF1O75570 445 aaKnown RBP10.06□□□□□ -0.8
TPM3-204ENST00000323144 PGA5P0DJD9 388 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 COX7A1P24310 79 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 UBE2E1P51965 193 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 ERVFRD-1P60508 538 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 CXCR4P61073 352 aa10.06□□□□□ -0.8
TPM3-204ENST00000323144 PTGES3Q15185 160 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms