RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ACTBP60709 375 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 ACTG1P63261 375 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 ZNF726P1Q15940 193 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 RNF212Q495C1 297 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 IL34Q6ZMJ4 242 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 RRM2BQ7LG56 351 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 EMG1Q92979 244 aaKnown RBP6.72□□□□□ -1.33
CNOT4-201ENST00000315544 RASL10BQ96S79 203 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 CCDC3Q9BQI4 270 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 ADAT1Q9BUB4 502 aaKnown RBP6.72□□□□□ -1.33
CNOT4-201ENST00000315544 BEX1Q9HBH7 125 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 TMEM138Q9NPI0 162 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 SHISA8B8ZZ34 492 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 CR1LQ2VPA4 569 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 SLC29A4Q7RTT9 530 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 CNTNAP3BQ96NU0 1288 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 NUDT22Q9BRQ3 303 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 CNTNAP3Q9BZ76 1288 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 ASH1LQ9NR48 2969 aaKnown RBP6.72□□□□□ -1.33
CNOT4-201ENST00000315544 DEPPQ9NTK1 212 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 DKKL1Q9UK85 242 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 PRELID3BQ9Y3B1 194 aa6.72□□□□□ -1.33
CNOT4-201ENST00000315544 TRAV1-1A0A0B4J248 108 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 PINLYPA6NC86 204 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 LIFP15018 202 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 SNTB1Q13884 538 aaKnown RBP6.71□□□□□ -1.33
CNOT4-201ENST00000315544 EIF2B1Q14232 305 aaKnown RBP6.71□□□□□ -1.33
CNOT4-201ENST00000315544 MEF2DQ14814 521 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 KLHL24Q6TFL4 600 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 OR10G4Q8NGN3 311 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 PIGMQ9H3S5 423 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 SEC61A2Q9H9S3 476 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 DHCR7Q9UBM7 475 aaKnown RBP6.71□□□□□ -1.33
CNOT4-201ENST00000315544 ATPIF1Q9UII2 106 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 MKL2Q9ULH7 1088 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 GTF2A1LQ9UNN4 478 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 MYO9BQ13459 2157 aa6.71□□□□□ -1.33
CNOT4-201ENST00000315544 WT1P19544 449 aaPredicted RBP6.71□□□□□ -1.34
CNOT4-201ENST00000315544 HES3Q5TGS1 186 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 IQCF2Q8IXL9 164 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 SLC22A24Q8N4F4 322 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 ARHGAP5-AS1Q96IT6 56 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 ADAD1Q96M93 576 aaKnown RBP6.71□□□□□ -1.34
CNOT4-201ENST00000315544 CABLES2Q9BTV7 478 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 TRBV23OR9-2A0A075B6M9 112 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 TRAV18A0A075B6X5 111 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 A6NIZ1 184 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF724A8MTY0 619 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 ARPC5O15511 151 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 RAD1O60671 282 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 CRABP1P29762 137 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 RAP1BP61224 184 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 RAP1AP62834 184 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 LGALS3BPQ08380 585 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 CDNFQ49AH0 187 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 WDR86Q86TI4 376 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 FAM219AQ8IW50 185 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 PRR22Q8IZ63 422 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 OR10G3Q8NGC4 313 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 SCNM1Q9BWG6 230 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 UQCC1Q9NVA1 299 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 GHRLQ9UBU3 117 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF69Q9UC07 566 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 NDRG3Q9UGV2 375 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 TINAGQ9UJW2 476 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 MRTO4Q9UKD2 239 aaKnown RBP6.71□□□□□ -1.34
CNOT4-201ENST00000315544 RPH3AQ9Y2J0 694 aaPredicted RBP6.71□□□□□ -1.34
CNOT4-201ENST00000315544 POMT1Q9Y6A1 747 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 ANK2Q01484 3957 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 CACNA1GO43497 2377 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 CMYA5Q8N3K9 4069 aa6.71□□□□□ -1.34
CNOT4-201ENST00000315544 RER1O15258 196 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ADAP1O75689 374 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MBPP02686 304 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 LIPCP11150 499 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 PGAM2P15259 253 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 DTYMKP23919 212 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MRPS15P82914 257 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 GATSQ8NAP1 163 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 CPEB3Q8NE35 698 aaKnown RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 GLRX2Q9NS18 164 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 MBD2Q9UBB5 411 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ZNF222Q9UK12 451 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 HHLA2Q9UM44 414 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 TACC2O95359 2948 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ELOA3DA6NLF2 546 aaPredicted RBP6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ATP6V1G2-DDX39BF2Z307 99 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 P2RY10O00398 339 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 DNPH1O43598 174 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 SNAPINO95295 136 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 SFTPBP07988 381 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 PSMB6P28072 239 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 GNRHRP30968 328 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ID3Q02535 119 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 ELOA3BQ3SY89 546 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 RAB12Q6IQ22 244 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 C5orf24Q7Z6I8 188 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 CDK20Q8IZL9 346 aa6.7□□□□□ -1.34
CNOT4-201ENST00000315544 LRRC18Q8N456 261 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms