RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 GABARAPL1Q9H0R8 117 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 PURGQ9UJV8 347 aaKnown RBP11.99□□□□□ -0.49
RFFL-201ENST00000315249 HLA-DOBP13765 273 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 CTLA4P16410 223 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 ZNF266Q14584 549 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 NAA40Q86UY6 237 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 GPR32P1Q8NGA4 272 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 MISP3Q96FF7 219 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 BARX1Q9HBU1 254 aaPredicted RBP11.99□□□□□ -0.49
RFFL-201ENST00000315249 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 NEU3Q9UQ49 428 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 hADV38S2A0JD32 116 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 CEACAM1P13688 526 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 CSF2RBP32927 897 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 SYT6Q5T7P8 510 aaPredicted RBP11.99□□□□□ -0.49
RFFL-201ENST00000315249 SPSB1Q96BD6 273 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 AKR1E2Q96JD6 320 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 PTDSS2Q9BVG9 487 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 AQP7P3A6NL99 342 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 IFITM5A6NNB3 132 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FOXO1Q12778 655 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FAAP20Q6NZ36 180 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 ZFAND2BQ8WV99 257 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 GMPPAQ96IJ6 420 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 OPN3Q9H1Y3 402 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 IL20Q9NYY1 176 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 PLEKHB1Q9UF11 243 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 OR5H8P0DN80 308 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FAHD2BQ6P2I3 314 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 ADGRG3Q86Y34 549 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FAHD2AQ96GK7 314 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 SCNM1Q9BWG6 230 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 GAL3ST2Q9H3Q3 398 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 TRAPPC4Q9Y296 219 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 AMMECR1Q9Y4X0 333 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 MYO7BQ6PIF6 2116 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 PMS2P2O95744 297 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FGF5P12034 268 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 VMA21Q3ZAQ7 101 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 TMEM251Q8N6I4 163 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 RANGRFQ9HD47 186 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 LIPT2A6NK58 231 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 ZNF785A8K8V0 405 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 RBP4P02753 201 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 HOXD11P31277 338 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 TMEM52Q8NDY8 209 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 OR10R2Q8NGX6 335 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 ERGIC1Q969X5 290 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 ASPDHA6ND91 283 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 AGAP14A8MT82 685 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 HPNP05981 417 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FUT3P21217 361 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 RFX2P48378 723 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 SLC25A1P53007 311 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 FLI1Q01543 452 aaPredicted RBP11.98□□□□□ -0.49
RFFL-201ENST00000315249 DERL3Q96Q80 235 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 F2RL2O00254 374 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 WDR38Q5JTN6 314 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 ZNF721Q8TF20 911 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
RFFL-201ENST00000315249 TBX19O60806 448 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 ARPC5LQ9BPX5 153 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 FOXJ2Q9P0K8 574 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 PSG11Q9UQ72 335 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 ATP6V1G1O75348 118 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 OR2F2O95006 317 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 THSD4Q6ZMP0 1018 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 PCGF1Q9BSM1 259 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 PARP12Q9H0J9 701 aaKnown RBP11.97□□□□□ -0.49
RFFL-201ENST00000315249 MS4A5Q9H3V2 200 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 HEATR1Q9H583 2144 aaKnown RBP11.97□□□□□ -0.49
RFFL-201ENST00000315249 KRASP01116 189 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 CCR9P51686 369 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 MRGPRDQ8TDS7 321 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 C20orf24Q9BUV8 137 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 TRAF3IP2O43734 574 aaPredicted RBP11.97□□□□□ -0.49
RFFL-201ENST00000315249 CYC1P08574 325 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 CEACAM3P40198 252 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 CYSLTR2Q9NS75 346 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 NDUFB11Q9NX14 153 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 LOC285556D6RIA3 1793 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 A0A0D9SG52 128 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 LOC101059948A0A1B0GTJ6 334 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 UBE2G2P60604 165 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 RFPL4BQ6ZWI9 263 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 CALHM3Q86XJ0 350 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 OR2T6Q8NHC8 308 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 IL17BQ9UHF5 180 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 ZNF230Q9UIE0 474 aaPredicted RBP11.97□□□□□ -0.49
RFFL-201ENST00000315249 TINAGQ9UJW2 476 aa11.97□□□□□ -0.49
RFFL-201ENST00000315249 A0A1W2PQM1 296 aa11.96□□□□□ -0.49
RFFL-201ENST00000315249 PRR33A8MZF0 331 aa11.96□□□□□ -0.49
RFFL-201ENST00000315249 OR7C2O60412 319 aa11.96□□□□□ -0.49
RFFL-201ENST00000315249 RPS27AP62979 156 aaKnown RBP11.96□□□□□ -0.49
RFFL-201ENST00000315249 UBA52P62987 128 aaKnown RBP11.96□□□□□ -0.49
RFFL-201ENST00000315249 OR10P1Q8NGE3 313 aa11.96□□□□□ -0.49
RFFL-201ENST00000315249 LIN37Q96GY3 246 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms