RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SPICQ8N5J4 248 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 SCCPDHQ8NBX0 429 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 OR13C9Q8NGT0 318 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 DERL3Q96Q80 235 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 OR14A2Q96R54 314 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 TMED9Q9BVK6 235 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 REG4Q9BYZ8 158 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 BPESC1Q9GZL8 116 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 TMEM138Q9NPI0 162 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 UFSP2Q9NUQ7 469 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 C1orf123Q9NWV4 160 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 NDUFB11Q9NX14 153 aa15.09■□□□□ 0.01
SSSCA1-201ENST00000309328 MEGF11A6BM72 1044 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 LYNX1G3V0Z9 82 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 CDIPTO14735 213 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 NDUFA2O43678 99 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 ARL6IP5O75915 188 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 ALDOBP05062 364 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 LYNX1P0DP58 116 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 USF1P22415 310 aaPredicted RBP15.08■□□□□ 0
SSSCA1-201ENST00000309328 MPZP25189 248 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 RANBP1P43487 201 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 HAAOP46952 286 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 MTCP1P56278 107 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 LOXL1Q08397 574 aaPredicted RBP15.08■□□□□ 0
SSSCA1-201ENST00000309328 MPPED2Q15777 294 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 TMEM155Q4W5P6 130 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 ACSM3Q53FZ2 586 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 WDR82Q6UXN9 313 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 WDR86Q86TI4 376 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 CDH26Q8IXH8 852 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 C12orf43Q96C57 262 aaKnown RBP15.08■□□□□ 0
SSSCA1-201ENST00000309328 RHOFQ9HBH0 211 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 WIPI2Q9Y4P8 454 aa15.08■□□□□ 0
SSSCA1-201ENST00000309328 MAP1AP78559 2803 aaPredicted RBP15.08■□□□□ 0
SSSCA1-201ENST00000309328 PPIAL4EA0A075B759 164 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 TRAV38-1A0A0B4J264 116 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 IGKV1-9A0A0C4DH69 117 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 FAM230AA0A1W2PPH8 454 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 TRIM64CA6NLI5 447 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 PPIAL4DF5H284 164 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 SC5DO75845 299 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 RGS9O75916 674 aaPredicted RBP15.07■□□□□ 0
SSSCA1-201ENST00000309328 LHBP01229 141 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 HCKP08631 526 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 PPIAL4FP0DN26 164 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 MUC1P15941 1255 aaPredicted RBP15.07■□□□□ 0
SSSCA1-201ENST00000309328 IL24Q13007 206 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 SPRNQ5BIV9 151 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 HAGHLQ6PII5 290 aaPredicted RBP15.07■□□□□ 0
SSSCA1-201ENST00000309328 UNQ9370/PRO34162Q6UXP9 181 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 MKXQ8IYA7 352 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 Q8IYB0 196 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 NKAIN3Q8N8D7 197 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 ZNF420Q8TAQ5 688 aaPredicted RBP15.07■□□□□ 0
SSSCA1-201ENST00000309328 AQP3Q92482 292 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 SLITRK2Q9H156 845 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 PPP1R3EQ9H7J1 279 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 RASL12Q9NYN1 266 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 PPIAL4AQ9Y536 164 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 CACNG2Q9Y698 323 aa15.07■□□□□ 0
SSSCA1-201ENST00000309328 SRRM5B3KS81 715 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 LGALS8O00214 317 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 NOS1APO75052 506 aaPredicted RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 IGHV2-70P01814 119 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 FOSL1P15407 271 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 IGFBP3P17936 291 aaPredicted RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 BDKRB2P30411 391 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 TGFBR2P37173 567 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 PMELP40967 661 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 LRRC28Q86X40 367 aaPredicted RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 FAM90A1Q86YD7 464 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 C11orf53Q8IXP5 236 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 SAXO1Q8IYX7 474 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 PNLDC1Q8NA58 520 aaKnown RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 ZSCAN4Q8NAM6 433 aaPredicted RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 OR13C5Q8NGS8 318 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 TRMT10AQ8TBZ6 339 aaKnown RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 LRRC29Q8WV35 223 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 RPL3LQ92901 407 aaKnown RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 RAB39BQ96DA2 213 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 FGF23Q9GZV9 251 aaPredicted RBP15.06■□□□□ 0
SSSCA1-201ENST00000309328 TCF7L1Q9HCS4 588 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 TAS2R4Q9NYW5 299 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 TREM2Q9NZC2 230 aa15.06■□□□□ 0
SSSCA1-201ENST00000309328 IGHV3-64DA0A0J9YX35 117 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 MAGEA13PA6NCF6 341 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 CYB5R3P00387 301 aaPredicted RBP15.05■□□□□ -0
SSSCA1-201ENST00000309328 UCHL1P09936 223 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 KISS1Q15726 138 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 NEDD8Q15843 81 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 MICBQ29980 383 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 SMIM21Q3B7S5 101 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 TIMM50Q3ZCQ8 353 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 HSD17B12Q53GQ0 312 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 TEX36Q5VZQ5 186 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 CD200R1LQ6Q8B3 271 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 CEACAM19Q7Z692 300 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 NPRL2Q8WTW4 380 aa15.05■□□□□ -0
SSSCA1-201ENST00000309328 MUL1Q969V5 352 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms