RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 GABARAPL3Q9BY60 117 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 GLIPR2Q9H4G4 154 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 PROCRQ9UNN8 238 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 CD96P40200 585 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 OR4C13Q8NGP0 309 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF426Q9BUY5 554 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 LTB4R2Q9NPC1 389 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 UQCC1Q9NVA1 299 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 DHCR7Q9UBM7 475 aaKnown RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 IGKV3-7A0A075B6H7 116 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 DCTDP32321 178 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 PCP4P48539 62 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SPRED3Q2MJR0 410 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF750Q32MQ0 723 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 EXD3Q8N9H8 876 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 LKAAEAR1Q8TD35 194 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 PELI1Q96FA3 418 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 CRYABP02511 175 aaKnown RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 FAM71E1Q6IPT2 247 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 TXLNGYQ9BZA5 131 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SPRY1O43609 319 aaPredicted RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SMIM6P0DI80 62 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 CSNK1EP49674 416 aaKnown RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SLC38A11Q08AI6 406 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 PARS2Q7L3T8 475 aaKnown RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 ADAM20O43506 726 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 FECHP22830 423 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 PPP1CCP36873 323 aaKnown RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 OR5C1Q8NGR4 320 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF815PA8K554 130 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SYNGR2O43760 224 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 ACTL6AO96019 429 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 FGF2P09038 288 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 APOBEC1P41238 236 aaKnown RBP12.11□□□□□ -0.47
TRIM56-201ENST00000306085 GPNMBQ14956 572 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 MYOFQ9NZM1 2061 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 IGHV3-20A0A0C4DH32 117 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 GEMIN2O14893 280 aaKnown RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CLDN18P56856 261 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 OR5AU1Q8NGC0 362 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CLDN20P56880 219 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 SLC37A1P57057 533 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 PRDX1Q06830 199 aaKnown RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 TMEM99Q8N816 258 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 NCMAPQ5T1S8 102 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 UBE2FQ969M7 185 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 MBLAC1A4D2B0 266 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 GAGE10A6NGK3 116 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 P01737 135 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 PKIAP61925 76 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 OLIG3Q7RTU3 272 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 MCHR2Q969V1 340 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 IQCF3P0C7M6 154 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CEACAM6P40199 344 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CACNG7P62955 275 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CXorf36Q9H7Y0 433 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 COA4Q9NYJ1 87 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CST5P28325 142 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 RIGQ13278 110 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 NEIL1Q96FI4 390 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 TECRQ9NZ01 308 aaKnown RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 CLPPQ16740 277 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-201ENST00000306085 TMPRSS13Q9BYE2 586 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 IL23AQ9NPF7 189 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 RELBQ01201 579 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 GDE1Q9NZC3 331 aa12.1□□□□□ -0.47
TRIM56-201ENST00000306085 SNRPGP15A8MWD9 76 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 SIAH2O43255 324 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 APCSP02743 223 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 METAP1P53582 386 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF121P58317 390 aaPredicted RBP12.09□□□□□ -0.47
TRIM56-201ENST00000306085 PRSS36Q5K4E3 855 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 PIPOXQ9P0Z9 390 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 FZR1Q9UM11 496 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 OR1N1Q8NGS0 311 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 ANXA10Q9UJ72 324 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 CLDN34H7C241 214 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 KCNAB1Q14722 419 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 Q5PR19 223 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 SAXO2Q658L1 398 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 NANOGP1Q8N7R0 232 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 IFT172Q9UG01 1749 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 CDRT15L2A8MXV6 281 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 LIPNQ5VXI9 398 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 TMEM179BQ7Z7N9 219 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 K7ESF4 209 aa12.09□□□□□ -0.47
TRIM56-201ENST00000306085 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
TRIM56-201ENST00000306085 DND1Q8IYX4 353 aaKnown RBP12.09□□□□□ -0.47
TRIM56-201ENST00000306085 PTX4Q96A99 478 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms