RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 OR5H8P0DN80 308 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 LPAR6P43657 344 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 TPPP2P59282 170 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 TUSC1Q2TAM9 212 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 NKAIN3Q8N8D7 197 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 OR52H1Q8NGJ2 320 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 OR4Q3Q8NH05 313 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 YIPF5Q969M3 257 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 MOGAT1Q96PD6 335 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 TTTY12Q9BZ98 90 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 FAM212BQ9NTI7 297 aaPredicted RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 NSG2Q9Y328 171 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 NQO2P16083 231 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 GPX2P18283 190 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 MRPS10P82664 201 aaKnown RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 VMA21Q3ZAQ7 101 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF331Q9NQX6 463 aaPredicted RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 PRSS50Q9UI38 385 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ADAMTSL3P82987 1691 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 A0A087WZY1 265 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 HPP00738 406 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 FAM58AQ8N1B3 248 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 P2RX4Q99571 388 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 TNRC6CQ9HCJ0 1690 aaKnown RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ECM29Q5VYK3 1845 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 FZD6O60353 706 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 SCO1O75880 301 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 CTSBP07858 339 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 MGPP08493 103 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF17P17021 662 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 AQP6Q13520 282 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 PHYHD1Q5SRE7 291 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF547Q8IVP9 402 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ARHGAP5-AS1Q96IT6 56 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 DCAF16Q9NXF7 216 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 DCTDP32321 178 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 RPS27AP62979 156 aaKnown RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 UBA52P62987 128 aaKnown RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 GNG3P63215 75 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 OR13G1Q8NGZ3 307 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 KIR2DS1A0A191URI9 304 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ACTL6AO96019 429 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 KIR2DS4P43632 304 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 CLDN20P56880 219 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 C21orf58P58505 322 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 KIR2DS1Q14954 304 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 MFSD4AQ8N468 514 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 OR2M5A3KFT3 312 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF90Q03938 601 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 TBCEQ15813 527 aaPredicted RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 C1orf185Q5T7R7 199 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 CLEC2AQ6UVW9 174 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 SLC22A18ASQ8N1D0 253 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 CXXC4Q9H2H0 198 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 EVA1AQ9H8M9 152 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 NTMQ9P121 344 aa6.93□□□□□ -1.3
SCN9A-201ENST00000303354 PRAF2O60831 178 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 IGHV3-23P01764 117 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 PPP3CBP16298 524 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 CD300LGQ6UXG3 332 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 IGKV3OR2-268A0A0C4DH90 116 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 CD96P40200 585 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 TMEM41BQ5BJD5 291 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 TMUB2Q71RG4 321 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 OR2A5Q96R48 311 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 PKMYT1Q99640 499 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 CYB5R3P00387 301 aaPredicted RBP6.92□□□□□ -1.3
SCN9A-201ENST00000303354 ATP1B1P05026 303 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 LGALS7P47929 136 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 PRRX1P54821 245 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 AESQ08117 197 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 JAM3Q9BX67 310 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 IL36GQ9NZH8 169 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 FOXJ2Q9P0K8 574 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 UFC1Q9Y3C8 167 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 FABP1P07148 127 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 Q1RN00 199 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF628Q5EBL2 1059 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 DCAF10Q5QP82 559 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 DGAT2L6Q6ZPD8 337 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 AQP8O94778 261 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 ZFP36L2P47974 494 aaKnown RBP6.92□□□□□ -1.3
SCN9A-201ENST00000303354 CD226Q15762 336 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 WDR38Q5JTN6 314 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 ZBTB37Q5TC79 503 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 MDP1Q86V88 176 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 FAM26EQ8N5C1 309 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 CCL19Q99731 98 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 KCNMB2Q9Y691 235 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 SSC5DA1L4H1 1573 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 GPX5O75715 221 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 PTTG1O95997 202 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 GABRA1P14867 456 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 G6PCP35575 357 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 CDCP2Q5VXM1 449 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 GUCD1Q96NT3 240 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF831Q5JPB2 1677 aa6.92□□□□□ -1.3
SCN9A-201ENST00000303354 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms