RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 ALOX12BO75342 701 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 ZNF253O75346 499 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 FAHP16930 419 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 NKG7Q16617 165 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 DMRTA1Q5VZB9 504 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 ZDHHC23Q8IYP9 409 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 AGBL5Q8NDL9 886 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 TEX101Q9BY14 249 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 SRD5A3Q9H8P0 318 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 RASL12Q9NYN1 266 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 HCSTQ9UBK5 93 aa13.36□□□□□ -0.27
SCN3B-201ENST00000299333 ZNF749O43361 778 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 ELAVL1Q15717 326 aaKnown RBP13.35□□□□□ -0.27
SCN3B-201ENST00000299333 FAM169BQ8N8A8 192 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 NAT6Q93015 286 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 PMS2P1A4D2B8 440 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 ICOSLGO75144 302 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 ZNF77Q15935 545 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 DCAF12Q5T6F0 453 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 WFIKKN1Q96NZ8 548 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 TXNIPQ9H3M7 391 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 HSPB8Q9UJY1 196 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 TMEM272A0A1B0GTI8 110 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 HMSDA8MTL9 139 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 PDE4DIPQ5VU43 2346 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 RBPJQ06330 500 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 HLA-DRB5Q30154 266 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 SPNS3Q6ZMD2 512 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 C6orf201Q7Z4U5 140 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 SEC11CQ9BY50 192 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 C20orf141Q9NUB4 165 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 URB1O60287 2271 aaKnown RBP13.35□□□□□ -0.27
SCN3B-201ENST00000299333 FAM157BP0CG42 384 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 DDTP30046 118 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 RAG2P55895 527 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 BSXQ3C1V8 233 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 PRSS54Q6PEW0 395 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 TBX15Q96SF7 602 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 ZNF426Q9BUY5 554 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 LAT2Q9GZY6 243 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 SIRT5Q9NXA8 310 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 IL19Q9UHD0 177 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 A4GNTQ9UNA3 340 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 TMED3Q9Y3Q3 217 aa13.35□□□□□ -0.27
SCN3B-201ENST00000299333 OR4C45A6NMZ5 311 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 PRSS1P07477 247 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 UQCRFS1P47985 274 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 HTRA3P83110 453 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 PDCD1Q15116 288 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 SHHQ15465 462 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 SLC26A10Q8NG04 563 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 OR5AU1Q8NGC0 362 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 GALMQ96C23 342 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 EGLN1Q9GZT9 426 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 BCL2L10Q9HD36 194 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 MTFP1Q9UDX5 166 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 FUT9Q9Y231 359 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 CCL26Q9Y258 94 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 K7ESM1 405 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 FABP2P12104 132 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 FGF9P31371 208 aaPredicted RBP13.34□□□□□ -0.27
SCN3B-201ENST00000299333 SSX1Q16384 188 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 C12orf73Q69YU5 71 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 NAT8Q9UHE5 227 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 C7orf77A4D0Y5 90 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 CDRT15L2A8MXV6 281 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
SCN3B-201ENST00000299333 IGHEP01854 428 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 DLK1P80370 383 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 INSM1Q01101 510 aaPredicted RBP13.34□□□□□ -0.27
SCN3B-201ENST00000299333 POM121L2Q96KW2 1035 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 OR51M1Q9H341 326 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 B9D1Q9UPM9 204 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 IGHV3-15A0A0B4J1V0 119 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 GFYI3L273 518 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 SEMA7AO75326 666 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 IGHA1P01876 353 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 IGHA2P01877 340 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 CD22P20273 847 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 TCL1AP56279 114 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 CLN3Q13286 438 aa13.34□□□□□ -0.27
SCN3B-201ENST00000299333 TRMT61AQ96FX7 289 aaKnown RBP13.34□□□□□ -0.27
SCN3B-201ENST00000299333 MBD1Q9UIS9 605 aaPredicted RBP13.34□□□□□ -0.27
SCN3B-201ENST00000299333 VAMP5O95183 116 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 KLKB1P03952 638 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 CD1BP29016 333 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 CYB561P49447 251 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 B3GNTL1Q67FW5 361 aaPredicted RBP13.33□□□□□ -0.27
SCN3B-201ENST00000299333 UBALD1Q8TB05 177 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 MOB3AQ96BX8 217 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 ARHGAP5-AS1Q96IT6 56 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 OR51B4Q9Y5P0 310 aa13.33□□□□□ -0.27
SCN3B-201ENST00000299333 MYH1P12882 1939 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 MYH4Q9Y623 1939 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 TLCD2A6NGC4 264 aa13.33□□□□□ -0.28
SCN3B-201ENST00000299333 HRASP01112 189 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms