RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 OR52B4Q8NGK2 314 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 OR1K1Q8NGR3 316 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 OR10K1Q8NGX5 313 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ZNF75AQ96N20 296 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 SLC6A7Q99884 636 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 TM2D1Q9BX74 207 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 POFUT1Q9H488 388 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 C12orf49Q9H741 205 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 KCNN3Q9UGI6 736 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 PRSS50Q9UI38 385 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 C5orf49A4QMS7 147 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ZNF503-AS2A6NEH8 195 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 MFNGO00587 321 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 SSX5O60225 188 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ZNF780AO75290 641 aaPredicted RBP7.92□□□□□ -1.14
PDPN-201ENST00000294489 MPZP25189 248 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 HRH1P35367 487 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 RAB1AP62820 205 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 MALLQ13021 153 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 RSU1Q15404 277 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ACSF3Q4G176 576 aaPredicted RBP7.92□□□□□ -1.14
PDPN-201ENST00000294489 ACTBL2Q562R1 376 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ZBTB37Q5TC79 503 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 NSUN5P2Q63ZY6 315 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 OR52W1Q6IF63 320 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 SEZ6L2Q6UXD5 910 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 NLRC3Q7RTR2 1065 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 TMED4Q7Z7H5 227 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 OR4K15Q8NH41 348 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 DNAJC13O75165 2243 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 CEP250Q9BV73 2442 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 SERPINE3A8MV23 424 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 GIPP09681 153 aaPredicted RBP7.92□□□□□ -1.14
PDPN-201ENST00000294489 EDN3P14138 238 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 FUT6P51993 359 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ATP1B3P54709 279 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 UXS1Q8NBZ7 420 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 GRPEL2Q8TAA5 225 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 NANOS1Q8WY41 292 aaKnown RBP7.92□□□□□ -1.14
PDPN-201ENST00000294489 PIGCQ92535 297 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 APOBEC3DQ96AK3 386 aaPredicted RBP7.92□□□□□ -1.14
PDPN-201ENST00000294489 GPR137Q96N19 417 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 CHIAQ9BZP6 476 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.92□□□□□ -1.14
PDPN-201ENST00000294489 DOCK7Q96N67 2140 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 FREM1Q5H8C1 2179 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 CNOT1A5YKK6 2376 aaKnown RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 LOC100509620A0A075B734 347 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 MBD3L4A6NDZ8 208 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 MBD3L3A6NE82 208 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 MBD3L5A6NJ08 208 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 CRYABP02511 175 aaKnown RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 OR4E1P0C645 316 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 GSTT2P0CG29 244 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 PRSS12P56730 875 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 RAP2BP61225 183 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 SNRPD2P62316 118 aaKnown RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 TBR1Q16650 682 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 PLEKHN1Q494U1 663 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 Q5BKY6 102 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 PLCXD3Q63HM9 321 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 MOB3CQ70IA8 216 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 FAM214BQ7L5A3 538 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 MUC20Q8N307 709 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 C9orf62Q8N4C0 152 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 MBD3L2Q8NHZ7 208 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 CHST6Q9GZX3 395 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 MYOZ1Q9NP98 299 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 PCDHB16Q9NRJ7 776 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 EIF3KQ9UBQ5 218 aaKnown RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 MKRN2OSH3BPM6 223 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 HTR3BO95264 441 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 KIR2DL2P43627 348 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 PPA1Q15181 289 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 ATPAF1Q5TC12 328 aaPredicted RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 RIF1Q5UIP0 2472 aaKnown RBP7.91□□□□□ -1.14
PDPN-201ENST00000294489 LAMTOR1Q6IAA8 161 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 OR2A2Q6IF42 318 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 ZDHHC22Q8N966 263 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 OR13C8Q8NGS7 320 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 ANAPC10Q9UM13 185 aa7.91□□□□□ -1.14
PDPN-201ENST00000294489 RTTNQ86VV8 2226 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 PLATP00750 562 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 CGAP01215 116 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 PMP2P02689 132 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 SERPINA5P05154 406 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 COX5AP20674 150 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 APLNRP35414 380 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 GK2Q14410 553 aaPredicted RBP7.9□□□□□ -1.14
PDPN-201ENST00000294489 C11orf88Q6PI97 169 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 SEM1Q6ZVN7 128 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 MRPL21Q7Z2W9 205 aaKnown RBP7.9□□□□□ -1.14
PDPN-201ENST00000294489 RTN4RL2Q86UN3 420 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 FTMTQ8N4E7 242 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 C9orf106Q8NAJ2 232 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 OR2AK2Q8NG84 335 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 OR11H4Q8NGC9 324 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 OR6K3Q8NGY3 331 aa7.9□□□□□ -1.14
PDPN-201ENST00000294489 POM121L2Q96KW2 1035 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms