RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ZNF107Q9UII5 783 aaPredicted RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 CDC14BO60729 498 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 PDGFBP01127 241 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-201ENST00000292478 PSG6Q00889 435 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 RELL2Q8NC24 303 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-201ENST00000292478 ARHGAP5-AS1Q96IT6 56 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 CYR61O00622 381 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 ANGPTL7O43827 346 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 RAC3P60763 192 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 BPIFCQ8NFQ6 507 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 OR51I2Q9H344 312 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 ZBTB25P24278 435 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 OR2B11Q5JQS5 317 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 COL13A1Q5TAT6 717 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-201ENST00000292478 OR10D3Q8NH80 312 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 C20orf24Q9BUV8 137 aa11.4□□□□□ -0.58
PTCD1-201ENST00000292478 FFAR1O14842 300 aa11.4□□□□□ -0.59
PTCD1-201ENST00000292478 GZMMP51124 257 aa11.4□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF768Q9H5H4 540 aaKnown RBP11.4□□□□□ -0.59
PTCD1-201ENST00000292478 TAAR3PQ9P1P4 343 aa11.4□□□□□ -0.59
PTCD1-201ENST00000292478 OR5B21A6NL26 309 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 CTLA4P16410 223 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF32P17041 273 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 P2RX3P56373 397 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 IRF3Q14653 427 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 ST3GAL2Q16842 350 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 PHYHD1Q5SRE7 291 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 C17orf47Q8NEP4 570 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 OR6S1Q8NH40 331 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 MOGAT1Q96PD6 335 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 GPR87Q9BY21 358 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 MFRPQ9BY79 579 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 MRM2Q9UI43 246 aaKnown RBP11.39□□□□□ -0.59
PTCD1-201ENST00000292478 TRIM77I1YAP6 450 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 PDCD6O75340 191 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 CELA2BP08218 269 aaPredicted RBP11.39□□□□□ -0.59
PTCD1-201ENST00000292478 CD96P40200 585 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 SURF2Q15527 256 aaPredicted RBP11.39□□□□□ -0.59
PTCD1-201ENST00000292478 CBLN3Q6UW01 205 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 C1orf210Q8IVY1 113 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 RAB40CQ96S21 281 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 FLRT3Q9NZU0 649 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 TMEM265A0A087WTH1 108 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 PRSS44E7EML9 344 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 GPR37O15354 613 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 H3F3AP84243 136 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 PRDX4Q13162 271 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 NHLRC1Q6VVB1 395 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 TVP23CQ96ET8 276 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 PHYHIPLQ96FC7 376 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 POM121L2Q96KW2 1035 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 MRPS18AQ9NVS2 196 aaKnown RBP11.39□□□□□ -0.59
PTCD1-201ENST00000292478 SMCHD1A6NHR9 2005 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 AQP7O14520 342 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 TMEM123Q8N131 208 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 OR5M8Q8NGP6 311 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 OR2Y1Q8NGV0 311 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 MPC1Q9Y5U8 109 aa11.39□□□□□ -0.59
PTCD1-201ENST00000292478 KIR2DS2P43631 304 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF90Q03938 601 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 LRRC10Q5BKY1 277 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 PABPC1L2AQ5JQF8 200 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 PWWP2BQ6NUJ5 590 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 MYOZ1Q9NP98 299 aaPredicted RBP11.38□□□□□ -0.59
PTCD1-201ENST00000292478 C9orf170A2RU37 121 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 LIPT2A6NK58 231 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 HMSDA8MTL9 139 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 DUS4LO95620 317 aaKnown RBP11.38□□□□□ -0.59
PTCD1-201ENST00000292478 AVPR2P30518 371 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 DHRS2Q13268 280 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF774Q6NX45 483 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 BTLAQ7Z6A9 289 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 MAGT1Q9H0U3 335 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 URGCP-MRPS24S4R325 110 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 MOSPD3O75425 235 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 SLC25A6P12236 298 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 CPN1P15169 458 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 SMIM7Q9BQ49 75 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 XKRY2A2RUG3 117 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 NDUFB3O43676 98 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 ZP3P21754 424 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 FGF7P21781 194 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 GNB1P62873 340 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF770Q6IQ21 691 aaPredicted RBP11.38□□□□□ -0.59
PTCD1-201ENST00000292478 SLC36A1Q7Z2H8 476 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 C17orf78Q8N4C9 275 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 ANGPTL6Q8NI99 470 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 RHOFQ9HBH0 211 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 NGFP01138 241 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 RAB7AP51149 207 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 PPP1CAP62136 330 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 IL13RA2Q14627 380 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 FXNQ16595 210 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 ZNF561Q8N587 486 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 OR4D11Q8NGI4 311 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 OR13D1Q8NGV5 346 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 LHX9Q9NQ69 397 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 PLA2G3Q9NZ20 509 aa11.38□□□□□ -0.59
PTCD1-201ENST00000292478 LY75O60449 1722 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms