RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 SIGIRRQ6IA17 410 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 SLC25A42Q86VD7 318 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 CASTOR1Q8WTX7 329 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 CLEC4MQ9H2X3 399 aaPredicted RBP16.73■□□□□ 0.27
BRAF-201ENST00000288602 PARPBPQ9NWS1 579 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 L7N2F9 121 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 M0R233 179 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 PI3P19957 117 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 VAMP1P23763 118 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 CD34P28906 385 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 NPY4RP50391 375 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 BAMBIQ13145 260 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 TAF9Q16594 264 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 ST8SIA4Q92187 359 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 APH1AQ96BI3 265 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 BORCS8Q96FH0 119 aa16.73■□□□□ 0.27
BRAF-201ENST00000288602 ZNF552Q9H707 407 aaPredicted RBP16.73■□□□□ 0.27
BRAF-201ENST00000288602 MCRIP1C9JLW8 97 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 CD79AP11912 226 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 AMY2BP19961 511 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 ZBTB25P24278 435 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 CCL11P51671 97 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 IL13RA1P78552 427 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 OPCMLQ14982 345 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 RSU1Q15404 277 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 PNLIPRP3Q17RR3 467 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 BRICD5Q6PL45 260 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 ZFP62Q8NB50 900 aaPredicted RBP16.72■□□□□ 0.27
BRAF-201ENST00000288602 SEC22AQ96IW7 307 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 OCSTAMPQ9BR26 566 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
BRAF-201ENST00000288602 SPRR3Q9UBC9 169 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 C5orf49A4QMS7 147 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 RBP2P50120 134 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 SNU13P55769 128 aaKnown RBP16.72■□□□□ 0.27
BRAF-201ENST00000288602 CLVS2Q5SYC1 327 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 MOB3CQ70IA8 216 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 SPSB1Q96BD6 273 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 TM2D1Q9BX74 207 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 LINC00470Q9BZP3 86 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 PLEKHJ1Q9NW61 149 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 PRSS50Q9UI38 385 aa16.72■□□□□ 0.27
BRAF-201ENST00000288602 IGKV1D-8A0A087WSZ0 117 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 C9orf170A2RU37 121 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 DHRS7CA6NNS2 312 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 CSTBP04080 98 aaKnown RBP16.71■□□□□ 0.27
BRAF-201ENST00000288602 NAT1P18440 290 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 CPT2P23786 658 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 MPZP25189 248 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 SEC61A1P61619 476 aaKnown RBP16.71■□□□□ 0.27
BRAF-201ENST00000288602 DHODHQ02127 395 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 PDCD1Q15116 288 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 CNN3Q15417 329 aaKnown RBP16.71■□□□□ 0.27
BRAF-201ENST00000288602 LYG2Q86SG7 212 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 GLRX5Q86SX6 157 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 MCEMP1Q8IX19 187 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 BCO1Q9HAY6 547 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 ANAPC10Q9UM13 185 aa16.71■□□□□ 0.27
BRAF-201ENST00000288602 IGKV1-12A0A0C4DH73 117 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 IGKV1D-12P01611 117 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 PPP3CBP16298 524 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 WT1P19544 449 aaPredicted RBP16.71■□□□□ 0.26
BRAF-201ENST00000288602 FAM189A2Q15884 450 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 LRRC37A5PQ49AS3 106 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 PLCXD3Q63HM9 321 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 HOGA1Q86XE5 327 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 ZNF100Q8IYN0 542 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 FAM109AQ8N4B1 249 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 ZDHHC22Q8N966 263 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 CCDC54Q8NEL0 328 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 CSNK2A3Q8NEV1 391 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 OR5H2Q8NGV7 314 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 TERB2Q8NHR7 220 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 Q96M66 194 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 METTL9Q9H1A3 318 aa16.71■□□□□ 0.26
BRAF-201ENST00000288602 MYOZ1Q9NP98 299 aaPredicted RBP16.71■□□□□ 0.26
BRAF-201ENST00000288602 CDRT15L2A8MXV6 281 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 EFSO43281 561 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 WISP2O76076 250 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 RGS11O94810 467 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 AP2S1P53680 142 aaPredicted RBP16.7■□□□□ 0.26
BRAF-201ENST00000288602 HLXQ14774 488 aaPredicted RBP16.7■□□□□ 0.26
BRAF-201ENST00000288602 KCTD9Q7L273 389 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 FAAP24Q9BTP7 215 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 C1QTNF5Q9BXJ0 243 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 CRIM1Q9NZV1 1036 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 ZNF850A8MQ14 1090 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 FAM25EA8MYX2 175 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 SERPINA5P05154 406 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 TBPP20226 339 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 PIGYQ3MUY2 71 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 TMEM42Q69YG0 159 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 DYRK2Q92630 601 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 PRR13Q9NZ81 148 aa16.7■□□□□ 0.26
BRAF-201ENST00000288602 ARHGAP21Q5T5U3 1957 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 SPINK2P20155 84 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 OR3A3P47888 321 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 OR3A2P47893 321 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 MPPED2Q15777 294 aa16.69■□□□□ 0.26
BRAF-201ENST00000288602 TMPRSS13Q9BYE2 586 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms