RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 GUSBP1Q15486 140 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 SCGB2B2Q4G0G5 96 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 PLCXD3Q63HM9 321 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 TFAP2EQ6VUC0 442 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 MRPL21Q7Z2W9 205 aaKnown RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 PXT1Q8NFP0 134 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 OR5M9Q8NGP3 310 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 NANOS1Q8WY41 292 aaKnown RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ST8SIA4Q92187 359 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 FBXW5Q969U6 566 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 WBP1Q96G27 269 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 TAAR6Q96RI8 345 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 PTTG3PQ9NZH4 202 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF292O60281 2723 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 IGKV1-12A0A0C4DH73 117 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 UBE2QL1A1L167 161 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 KLK10O43240 276 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 AKR7A2O43488 359 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF780AO75290 641 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ATP6V1G1O75348 118 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 OR2A4O95047 310 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 PLATP00750 562 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 IGKV1D-12P01611 117 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 IFNA6P05013 189 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 OR4E1P0C645 316 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 HLXQ14774 488 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 PPA1Q15181 289 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ATPAF1Q5TC12 328 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 RTL6Q6ICC9 239 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 MDP1Q86V88 176 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 HOGA1Q86XE5 327 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 MUC20Q8N307 709 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ASCC1Q8N9N2 400 aaKnown RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 OR11H4Q8NGC9 324 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 OR56B2PQ8NGI1 322 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 ZNF431Q8TF32 576 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-201ENST00000276573 WNT2BQ93097 391 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 MRGPRFQ96AM1 343 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 OR2A7Q96R45 310 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 SLA2Q9H6Q3 261 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 IL36GQ9NZH8 169 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 PIPOXQ9P0Z9 390 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 MGAT4AQ9UM21 535 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 VSIG4Q9Y279 399 aa8.28□□□□□ -1.08
TRIM55-201ENST00000276573 MYO7BQ6PIF6 2116 aa8.27□□□□□ -1.08
TRIM55-201ENST00000276573 TNRC6AQ8NDV7 1962 aaKnown RBP8.27□□□□□ -1.09
TRIM55-201ENST00000276573 SERPINE3A8MV23 424 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 AHRRA9YTQ3 701 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 CST4P01036 141 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 IGHV1-2P23083 117 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 GABRR1P24046 479 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 DNASE1P24855 282 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 WNT5AP41221 380 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 KIR2DL2P43627 348 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-201ENST00000276573 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 PRDX4Q13162 271 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 MICBQ29980 383 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 C4orf46Q504U0 113 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 ACTBL2Q562R1 376 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 VAX1Q5SQQ9 334 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 SIGIRRQ6IA17 410 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 C6orf201Q7Z4U5 140 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 TMED4Q7Z7H5 227 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 CCDC36Q8IYA8 594 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 GCNT2Q8N0V5 402 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 C9orf62Q8N4C0 152 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 ZDHHC22Q8N966 263 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 C9orf106Q8NAJ2 232 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 ZSCAN4Q8NAM6 433 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-201ENST00000276573 CSNK2A3Q8NEV1 391 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 OR2AK2Q8NG84 335 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 OR51F2Q8NH61 342 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 MRPS24Q96EL2 167 aaKnown RBP8.27□□□□□ -1.09
TRIM55-201ENST00000276573 ST6GALNAC5Q9BVH7 336 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 CHIAQ9BZP6 476 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 OPA3Q9H6K4 179 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 PCDHB16Q9NRJ7 776 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 CA10Q9NS85 328 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 PLEKHJ1Q9NW61 149 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 GPR160Q9UJ42 338 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 CUL9Q8IWT3 2517 aa8.27□□□□□ -1.09
TRIM55-201ENST00000276573 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-201ENST00000276573 RAP2BP61225 183 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 SNRPD2P62316 118 aaKnown RBP8.26□□□□□ -1.09
TRIM55-201ENST00000276573 GABRA6Q16445 453 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 TAF9Q16594 264 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 C2orf68Q2NKX9 166 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 CEACAM21Q3KPI0 293 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 Q6ZS92 163 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 Q6ZT83 130 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 SLC25A42Q86VD7 318 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 CALHM1Q8IU99 346 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 OSR2Q8N2R0 312 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 SLC30A7Q8NEW0 376 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 OR5L1Q8NGL2 311 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 OR2T35Q8NGX2 323 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 GON7Q9BXV9 100 aa8.26□□□□□ -1.09
TRIM55-201ENST00000276573 CRIM1Q9NZV1 1036 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms