RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 GPR146Q96CH1 333 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 DEFB118Q96PH6 123 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 FLRT3Q9NZU0 649 aa8.15□□□□□ -1.11
PDGFC-201ENST00000274071 WIPF3A6NGB9 483 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 H3BNC9 293 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 COCHO43405 550 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF217O75362 1048 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 UPK3AO75631 287 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 HMGN2P05204 90 aaKnown RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 TUBG1P23258 451 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 IMPA1P29218 277 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 VIPR2P41587 438 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 TGM3Q08188 693 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 SMIM21Q3B7S5 101 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 CST9LP1Q5W188 147 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 LCN10Q6JVE6 187 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 TRAPPC6BQ86SZ2 158 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 OR14C36Q8NHC7 312 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 CTHRC1Q96CG8 243 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ZDHHC3Q9NYG2 299 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 GPR132Q9UNW8 380 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 A0A1B0GUS0 222 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 K7ERU9 68 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 HIST1H1CP16403 213 aaKnown RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 KHKP50053 298 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ERVS71-1P61550 626 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ARF6P62330 175 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ARHGAP11BQ3KRB8 267 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 TRIM61Q5EBN2 209 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF506Q5JVG8 444 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 DEFB128Q7Z7B8 93 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 TGIF2LYQ8IUE0 185 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 APH1AQ96BI3 265 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 GABRG3Q99928 467 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 MEGF9Q9H1U4 602 aa8.14□□□□□ -1.11
PDGFC-201ENST00000274071 MTIF3Q9H2K0 278 aaKnown RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 ELL3Q9HB65 397 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 MKKSQ9NPJ1 570 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 C14orf166Q9Y224 244 aaKnown RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 MRPS28Q9Y2Q9 187 aaKnown RBP8.14□□□□□ -1.11
PDGFC-201ENST00000274071 A0A1B0GVT2 93 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CTSAP10619 480 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 TSTA3Q13630 321 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 IAH1Q2TAA2 248 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ACTL10Q5JWF8 245 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 FAM90A2PQ658T7 463 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SP5Q6BEB4 398 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 Q6ZWC4 215 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SGPP2Q8IWX5 399 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SAXO1Q8IYX7 474 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 D2HGDHQ8N465 521 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 NECAP1Q8NC96 275 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 FBXO22Q8NEZ5 403 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 VN1R17PQ8TDU5 208 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ADAMTS15Q8TE58 950 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 GRHL3Q8TE85 626 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 TMEM234Q8WY98 164 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 TNFRSF13CQ96RJ3 184 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 RASL10BQ96S79 203 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ZBP1Q9H171 429 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 GLIPR2Q9H4G4 154 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ADAP2Q9NPF8 381 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SLC5A6Q9Y289 635 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SPTBP11277 2137 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 M0R296 226 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ZIC2O95409 532 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 SYNGR4O95473 234 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 PSG1P11464 419 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 NPPBP16860 134 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 RPS4Y1P22090 263 aaKnown RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CNN1P51911 297 aaKnown RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 PRDX4Q13162 271 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CDKN3Q16667 212 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CLEC12BQ2HXU8 276 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 PHF19Q5T6S3 580 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ZNF468Q5VIY5 522 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 FAM89BQ8N5H3 189 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 OR6K6Q8NGW6 343 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 TMEM9BQ9NQ34 198 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 LSM5Q9Y4Y9 91 aaKnown RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 DOCK8Q8NF50 2099 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 LAMA3Q16787 3333 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 FAM221AA4D161 298 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 F5H5T6 163 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 PLPP1O14494 284 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 PDGFBP01127 241 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 BMP5P22003 454 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 AK4P27144 223 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CDKN1AP38936 164 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 RAB28P51157 221 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 CLDN6P56747 220 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 HYAL1Q12794 435 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 VAMP3Q15836 100 aa8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ACOT6Q3I5F7 207 aaPredicted RBP8.13□□□□□ -1.11
PDGFC-201ENST00000274071 ELOA3BQ3SY89 546 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms