RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 DSCR4P56555 118 aaPredicted RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 GRB2P62993 217 aaKnown RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 AIMP2Q13155 320 aaKnown RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 MPPED2Q15777 294 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 TMEM128Q5BJH2 165 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 HOGA1Q86XE5 327 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 GPR137CQ8N3F9 429 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 OR5T2Q8NGG2 359 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 OR10D3Q8NH80 312 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 MRPS24Q96EL2 167 aaKnown RBP14.53□□□□□ -0.08
VPS54-201ENST00000272322 FAM96BQ9Y3D0 163 aa14.53□□□□□ -0.08
VPS54-201ENST00000272322 CADP27708 2225 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 A0A0A6YYH2 397 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 A6NJ64 397 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 DUS4LO95620 317 aaKnown RBP14.52□□□□□ -0.08
VPS54-201ENST00000272322 HPP00738 406 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 SLC16A14Q7RTX9 510 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 TIPARPQ7Z3E1 657 aaKnown RBP14.52□□□□□ -0.08
VPS54-201ENST00000272322 KCNRGQ8N5I3 272 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 P4HTMQ9NXG6 502 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 PADI1Q9ULC6 663 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 PCNX2A6NKB5 2137 aa14.52□□□□□ -0.08
VPS54-201ENST00000272322 DIRAS3O95661 229 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 RPS27AP62979 156 aaKnown RBP14.52□□□□□ -0.09
VPS54-201ENST00000272322 SUPT4H1P63272 117 aaKnown RBP14.52□□□□□ -0.09
VPS54-201ENST00000272322 H3F3AP84243 136 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 MC2RQ01718 297 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 ECH1Q13011 328 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 SEMA6DQ8NFY4 1073 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 NABP1Q96AH0 204 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 LRRC46Q96FV0 321 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 CALHM2Q9HA72 323 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 POLEQ07864 2286 aa14.52□□□□□ -0.09
VPS54-201ENST00000272322 A0A0D9SG52 128 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 FAM74A7A6NL05 159 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 MFNGO00587 321 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 BCL2L11O43521 198 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 FAM74A3Q4VXF1 159 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 SLC25A53Q5H9E4 307 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 OR6S1Q8NH40 331 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 RTBDNQ9BSG5 229 aaPredicted RBP14.51□□□□□ -0.09
VPS54-201ENST00000272322 NAA11Q9BSU3 229 aaPredicted RBP14.51□□□□□ -0.09
VPS54-201ENST00000272322 GPR132Q9UNW8 380 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 ZFHX2Q9C0A1 2572 aaPredicted RBP14.51□□□□□ -0.09
VPS54-201ENST00000272322 OR6C65A6NJZ3 312 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 GPR31O00270 319 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 XRCC2O43543 280 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 OR7C1O76099 320 aaPredicted RBP14.51□□□□□ -0.09
VPS54-201ENST00000272322 MELTFP08582 738 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 FGF5P12034 268 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 CLDN15P56746 228 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 IL11RAQ14626 422 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 AADACL3Q5VUY0 350 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 MOB3CQ70IA8 216 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 FBXL14Q8N1E6 418 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 SPTSSAQ969W0 71 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 BORCS8Q96FH0 119 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 RNF126Q9BV68 326 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 IGKV1-27A0A075B6S5 117 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 DKK1O94907 266 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 ZP3P21754 424 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 NME2P22392 152 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 OR2A2Q6IF42 318 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 DTWD2Q8NBA8 298 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 PTX4Q96A99 478 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 SLC6A15Q9H2J7 730 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 FLVCR1Q9Y5Y0 555 aa14.51□□□□□ -0.09
VPS54-201ENST00000272322 ZNF705EA8MWA4 302 aaPredicted RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 CBR3O75828 277 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 CFPP27918 469 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 RBMXP38159 391 aaKnown RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 IAH1Q2TAA2 248 aaPredicted RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 THOC3Q96J01 351 aaKnown RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 PAPOLGQ9BWT3 736 aaKnown RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 TREM1Q9NP99 234 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 PIEZO2Q9H5I5 2752 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 NPIPB13A6NJU9 1138 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 NPIPB4C9JG80 1138 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 HLA-HP01893 362 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 JMJD7P0C870 316 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 ZNF92Q03936 586 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 CRIP3Q6Q6R5 217 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 ZDHHC22Q8N966 263 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 OR5L1Q8NGL2 311 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 ANGPTL4Q9BY76 406 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 RASL12Q9NYN1 266 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 TPRP12270 2363 aaKnown RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 ZNF587BE7ETH6 402 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 CD8AP01732 235 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 CNR1P21554 472 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 HIST3H3Q16695 136 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 PLEKHN1Q494U1 663 aaPredicted RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 ACER2Q5QJU3 275 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 MEX3BQ6ZN04 569 aaKnown RBP14.5□□□□□ -0.09
VPS54-201ENST00000272322 TMEM123Q8N131 208 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 OR5AP2Q8NGF4 316 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 LIME1Q9H400 295 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 MOB1AQ9H8S9 216 aa14.5□□□□□ -0.09
VPS54-201ENST00000272322 EIF1BO60739 113 aaKnown RBP14.49□□□□□ -0.09
VPS54-201ENST00000272322 MTRF1O75570 445 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms