RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ARHGAP5-AS1Q96IT6 56 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 C2orf50Q96LR7 162 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 UCN2Q96RP3 112 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 NIPSNAP3BQ9BS92 247 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PLEKHA2Q9HB19 425 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 RPS10-NUDT3A0A1W2PQS6 291 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 HIST1H1DP16402 221 aaKnown RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 RPL12P30050 165 aaKnown RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 RPS10P46783 165 aaKnown RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 ZFP36L2P47974 494 aaKnown RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 LSM6P62312 80 aaKnown RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 OR2M3Q8NG83 312 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PPP1R1CQ8WVI7 109 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PPP1R14DQ9NXH3 145 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PTPRFP10586 1907 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 E5RGE8 158 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CT45A6P0DMU7 189 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CT45A5P0DMU8 189 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CT45A7P0DMV0 189 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 M6PRP20645 277 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 THBS3P49746 956 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 SUB1P53999 127 aaKnown RBP eCLIP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PRSS12P56730 875 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CT45A1Q5HYN5 189 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 OR52N4Q8NGI2 321 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CT45A3Q8NHU0 189 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 SLC52A3Q9NQ40 469 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 NSG2Q9Y328 171 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 A0A1W2PQM1 296 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 ABCD4O14678 606 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 ZNF354AO60765 605 aaPredicted RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 GP1BAP07359 652 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 SELENOPP49908 381 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PDCD1Q15116 288 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 FXNQ16595 210 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CXorf67Q86X51 503 aaPredicted RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 LFNGQ8NES3 379 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 OR52B4Q8NGK2 314 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 OR13G1Q8NGZ3 307 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 RBPMSQ93062 196 aaKnown RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 PIGMQ9H3S5 423 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
TIMP3-201ENST00000266085 C4orf51C9J302 202 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 OGG1O15527 345 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 CTAG2O75638 210 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 TMEM272A0A1B0GTI8 110 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 NDUFB6O95139 128 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 CELA2AP08217 269 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 SP9P0CG40 484 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 CA6P23280 308 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 RPL35P42766 123 aaKnown RBP13.67□□□□□ -0.22
TIMP3-201ENST00000266085 PRSS53Q2L4Q9 553 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 OR2Z1Q8NG97 314 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 GNPNAT1Q96EK6 184 aaPredicted RBP13.67□□□□□ -0.22
TIMP3-201ENST00000266085 SUCNR1Q9BXA5 334 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 INTS1Q8N201 2190 aaKnown RBP13.67□□□□□ -0.22
TIMP3-201ENST00000266085 IL5P05113 134 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 H2AFB1P0C5Y9 115 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 MLF1P58340 268 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 TUSC5Q8IXB3 177 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 ST8SIA4Q92187 359 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 PARP12Q9H0J9 701 aaKnown RBP13.67□□□□□ -0.22
TIMP3-201ENST00000266085 RNF150Q9ULK6 438 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 LGALS8O00214 317 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 LIFP15018 202 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 RTL8BQ17RB0 113 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 KCNIP4Q6PIL6 250 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 Q6ZRG5 221 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 CMBLQ96DG6 245 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 WDR89Q96FK6 387 aaPredicted RBP13.67□□□□□ -0.22
TIMP3-201ENST00000266085 C19orf12Q9NSK7 152 aa13.67□□□□□ -0.22
TIMP3-201ENST00000266085 DOCK6Q96HP0 2047 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 F6UZH7 168 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 FTH1P19P0C7X4 201 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 DHODHQ02127 395 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 PRDX4Q13162 271 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 PLA1AQ53H76 456 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 CDH26Q8IXH8 852 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 ABHD3Q8WU67 409 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 ROS1P08922 2347 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 SSSCA1O60232 199 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 CD82P27701 267 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 PSMB3P49720 205 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 ELLP55199 621 aaPredicted RBP13.66□□□□□ -0.22
TIMP3-201ENST00000266085 ASB13Q8WXK3 278 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 RPH3ALQ9UNE2 315 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 TMEM30CPA0ZSE6 113 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 ZFP92A6NM28 416 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 TMIGD3P0DMS9 266 aaPredicted RBP13.66□□□□□ -0.22
TIMP3-201ENST00000266085 TGM1P22735 817 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 HIST2H3PS2Q5TEC6 136 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 OR10P1Q8NGE3 313 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 ABHD1Q96SE0 405 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
TIMP3-201ENST00000266085 GALR2O43603 387 aaPredicted RBP13.65□□□□□ -0.22
TIMP3-201ENST00000266085 CYC1P08574 325 aa13.65□□□□□ -0.22
TIMP3-201ENST00000266085 C17orf107Q6ZR85 190 aa13.65□□□□□ -0.22
TIMP3-201ENST00000266085 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms