RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 PLEKHA2Q9HB19 425 aa14.46□□□□□ -0.09
GPC1-201ENST00000264039 MSL2Q9HCI7 577 aa14.46□□□□□ -0.09
GPC1-201ENST00000264039 GPR173Q9NS66 373 aa14.46□□□□□ -0.09
GPC1-201ENST00000264039 PRSS38A1L453 326 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 H0YIG0 161 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 PGA3P0DJD8 388 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 CDAP32320 146 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 SFTPDP35247 375 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 BIDP55957 195 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 SCAND1P57086 179 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 TMEM268Q5VZI3 342 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 BTNL8Q6UX41 500 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 Q7L0L9 218 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 DTWD2Q8NBA8 298 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 ZNF764Q96H86 408 aaPredicted RBP14.45□□□□□ -0.1
GPC1-201ENST00000264039 SYT3Q9BQG1 590 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 MSTNO14793 375 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 CEACAM5P06731 702 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 IL2RGP31785 369 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 DAZLQ92904 295 aaKnown RBP14.45□□□□□ -0.1
GPC1-201ENST00000264039 IL22RA2Q969J5 263 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 OR2A5Q96R48 311 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 GPHA2Q96T91 129 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 GPR132Q9UNW8 380 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 SLC5A6Q9Y289 635 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 GOLT1BQ9Y3E0 138 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 ARHGEF17Q96PE2 2063 aaPredicted RBP14.45□□□□□ -0.1
GPC1-201ENST00000264039 HOGA1Q86XE5 327 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 PBOV1Q9GZY1 135 aa14.45□□□□□ -0.1
GPC1-201ENST00000264039 C8orf33Q9H7E9 229 aaPredicted RBP14.45□□□□□ -0.1
GPC1-201ENST00000264039 YBX2Q9Y2T7 364 aaKnown RBP14.45□□□□□ -0.1
GPC1-201ENST00000264039 A8MVM7 634 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 FTCDNL1E5RQL4 147 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 HLA-DOBP13765 273 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 BMP5P22003 454 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 CD200P41217 278 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 ZNF266Q14584 549 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 FAHD2BQ6P2I3 314 aaPredicted RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 KDF1Q8NAX2 398 aaPredicted RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 RPS4Y2Q8TD47 263 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 FAHD2AQ96GK7 314 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 TMEM100Q9NV29 134 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 TMED7-TICAM2A0A0A6YYA0 188 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 M0R143 59 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 TMEM127O75204 238 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 FOLR2P14207 255 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 NKX2-1P43699 371 aaPredicted RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 ZNF41P51814 821 aaPredicted RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 SLC10A1Q14973 349 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 OR5C1Q8NGR4 320 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 OR13G1Q8NGZ3 307 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 OR1E3Q8WZA6 343 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 CYYR1Q96J86 154 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 AURKAIP1Q9NWT8 199 aaPredicted RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 POMT1Q9Y6A1 747 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 H7BYZ3 331 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 CLDN34H7C241 214 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 LYPD3O95274 346 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 MMP16P51512 607 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 CCL20P78556 96 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 OR5I1Q13606 314 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 COL13A1Q5TAT6 717 aaPredicted RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 SLC43A2Q8N370 569 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 SLC26A10Q8NG04 563 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 SNIP1Q8TAD8 396 aaKnown RBP14.44□□□□□ -0.1
GPC1-201ENST00000264039 COPS7AQ9UBW8 275 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 SHANK1Q9Y566 2161 aa14.44□□□□□ -0.1
GPC1-201ENST00000264039 DOCK11Q5JSL3 2073 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 TRAV34A0A0B4J273 112 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 TCF21O43680 179 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 TRAPPC6AO75865 159 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 ABHD16AO95870 558 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 CTHP32929 405 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 KIR2DS3Q14952 304 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 CA13Q8N1Q1 262 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 LRRC18Q8N456 261 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 TIMM29Q9BSF4 260 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 PLK3Q9H4B4 646 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 STRAPQ9Y3F4 350 aaKnown RBP14.43□□□□□ -0.1
GPC1-201ENST00000264039 TRAV36DV7A0A075B6V5 113 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 A6NNC1 897 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 SHISA8B8ZZ34 492 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 STARD6P59095 220 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 RND3P61587 244 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 HLA-DRB3P79483 266 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 PHF3Q92576 2039 aaKnown RBP14.43□□□□□ -0.1
GPC1-201ENST00000264039 APODP05090 189 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 HSD11B2P80365 405 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 TLE4Q04727 773 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 KIAA2026Q5HYC2 2103 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 LIN37Q96GY3 246 aaPredicted RBP14.43□□□□□ -0.1
GPC1-201ENST00000264039 CCDC74BQ96LY2 380 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 FANCMQ8IYD8 2048 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 AHCTF1Q8WYP5 2266 aa14.43□□□□□ -0.1
GPC1-201ENST00000264039 SPINT1O43278 529 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 IGHV2-5P01817 119 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 CD1AP06126 327 aa14.42□□□□□ -0.1
GPC1-201ENST00000264039 POLR2HP52434 150 aaKnown RBP14.42□□□□□ -0.1
GPC1-201ENST00000264039 UNC119Q13432 240 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms