RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 AKR7LQ8NHP1 331 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 FAAP24Q9BTP7 215 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 TET1Q8NFU7 2136 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 PRRT4C9JH25 899 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 BMPR1BO00238 502 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 GNB2P62879 340 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 LSM2Q9Y333 95 aaKnown RBP15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 TOX3O15405 576 aaPredicted RBP15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 SLC25A1P53007 311 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 NUDT8Q8WV74 236 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 OCEL1Q9H607 264 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 CTF1Q16619 201 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 OR1N1Q8NGS0 311 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 OTOSQ8NHW6 89 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 ETHE1O95571 254 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 FOXB2Q5VYV0 432 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 DHRS7BQ6IAN0 325 aaPredicted RBP15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 CXCL16Q9H2A7 254 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 LRP5O75197 1615 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 STRCP1A6NGW2 1772 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 HRO43593 1189 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 FPR2P25090 351 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 RAG2P55895 527 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 PTOV1Q86YD1 416 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 OR52B4Q8NGK2 314 aa15.72■□□□□ 0.11
NOTCH3-201ENST00000263388 LRRC10Q5BKY1 277 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 ZNF646O15015 1829 aaPredicted RBP15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 TMEM30CPA0ZSE6 113 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 SLC22A20A6NK97 555 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 FDX2Q6P4F2 183 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 ADPRHL1Q8NDY3 354 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 C6orf106Q9H6K1 298 aaPredicted RBP15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 LRP12Q9Y561 859 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 DUS4LO95620 317 aaKnown RBP15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 SCAND1P57086 179 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 WDR73Q6P4I2 378 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 OR8B4Q96RC9 309 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 TEX101Q9BY14 249 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 B9D1Q9UPM9 204 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 ZNF835Q9Y2P0 537 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 A0A087WUJ7 227 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 AKR7A2O43488 359 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 SPCS3P61009 180 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 CCDC190Q86UF4 302 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 SIGLEC11Q96RL6 698 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 MED29Q9NX70 200 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 IGHV3-15A0A0B4J1V0 119 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 PLPP2O43688 288 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 PSMB2P49721 201 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 FABP4P15090 132 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 PJVKQ0ZLH3 352 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 ANKRD33Q7Z3H0 272 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 MAGT1Q9H0U3 335 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 TRAPPC4Q9Y296 219 aa15.71■□□□□ 0.11
NOTCH3-201ENST00000263388 HRASP01112 189 aa15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 B4GALT1P15291 398 aa15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 PMCHP20382 165 aa15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 GNG4P50150 75 aa15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 ZNF816Q0VGE8 651 aaPredicted RBP15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 TUSC1Q2TAM9 212 aa15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.71■□□□□ 0.1
NOTCH3-201ENST00000263388 FCMRO60667 390 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 LTB4R2Q9NPC1 389 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 GTF3C1Q12789 2109 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 NOTCH3Q9UM47 2321 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 LRRK1Q38SD2 2015 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 WBP2Q969T9 261 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 TMEM230Q96A57 120 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 DEFB127Q9H1M4 99 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 OCIAD1Q9NX40 245 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 ASB1Q9Y576 335 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 PAX5Q02548 391 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 FUT7Q11130 342 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 CMBLQ96DG6 245 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 NEIL1Q96FI4 390 aaPredicted RBP15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 RCL1Q9Y2P8 373 aaKnown RBP15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 FAM221AA4D161 298 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 OR2W3Q7Z3T1 314 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 SPACA9Q96E40 222 aaPredicted RBP15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 C1QTNF6Q9BXI9 259 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 TAAR3PQ9P1P4 343 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 SLC25A35Q3KQZ1 300 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 MAMSTRQ6ZN01 415 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 GLCCI1Q86VQ1 547 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 SHANK1Q9Y566 2161 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 EDIL3O43854 480 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 GP1BAP07359 652 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 FAHP16930 419 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 LINC00303Q3SY05 128 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 FFAR4Q5NUL3 377 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 LINC01465Q8N7H1 131 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 OR1F12Q8NHA8 337 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 KISS1RQ969F8 398 aaPredicted RBP15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 NTNG2Q96CW9 530 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 TGFBR1P36897 503 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 MDH2P40926 338 aaKnown RBP15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 KIR2DS2P43631 304 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 B3GNTL1Q67FW5 361 aaPredicted RBP15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 DOK1Q99704 481 aa15.7■□□□□ 0.1
NOTCH3-201ENST00000263388 PIAS2O75928 621 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms