RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 HIST1H2AAQ96QV6 131 aa19.59■□□□□ 0.73
SMARCB1-201ENST00000263121 NUDT16L1Q9BRJ7 211 aaKnown RBP19.59■□□□□ 0.73
SMARCB1-201ENST00000263121 CNTNAP3Q9BZ76 1288 aa19.59■□□□□ 0.73
SMARCB1-201ENST00000263121 BANF2Q9H503 90 aa19.59■□□□□ 0.73
SMARCB1-201ENST00000263121 A0A0A6YYD4 124 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 OR5B21A6NL26 309 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 PLA2G10O15496 165 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 ANGPTL7O43827 346 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 PTTG1O95997 202 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 CD3GP09693 182 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 PTHLHP12272 177 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 GPM6AP51674 278 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 RPS27AP62979 156 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 SNTB2Q13425 540 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 TRIM16LQ309B1 348 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 RNASE12Q5GAN4 147 aaKnown RBP19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 Q6ZNX1 250 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 OR10K1Q8NGX5 313 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 LILRB4Q8NHJ6 448 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 METTL9Q9H1A3 318 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 SPEF1Q9Y4P9 236 aa19.58■□□□□ 0.72
SMARCB1-201ENST00000263121 TPRP12270 2363 aaKnown RBP19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 IGKV1-12A0A0C4DH73 117 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 WIPF3A6NGB9 483 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF732B4DXR9 585 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 ATXN7O15265 892 aaPredicted RBP19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 PLATP00750 562 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 IGKV1D-12P01611 117 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 MGMTP16455 207 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 SERPINA2P20848 420 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 FAM189A2Q15884 450 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 WFDC8Q8IUA0 241 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 ZSCAN4Q8NAM6 433 aaPredicted RBP19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 OR52I2Q8NH67 350 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 RNF170Q96K19 258 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 NICN1Q9BSH3 213 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 IL36GQ9NZH8 169 aa19.57■□□□□ 0.72
SMARCB1-201ENST00000263121 LINC00854A0A1B0GVQ3 168 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 FAM90A27PA6NNH2 459 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 CHRM2P08172 466 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 GLRXP35754 106 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 VEGFCP49767 419 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 ST3GAL2Q16842 350 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 RGS7BPQ6MZT1 257 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 MTFR2Q6P444 385 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 TMEM108Q6UXF1 575 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 FAM89BQ8N5H3 189 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF611Q8N823 705 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 FCAMRQ8WWV6 532 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 RNASE6Q93091 150 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 ZC3HAV1LQ96H79 300 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 URM1Q9BTM9 101 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 TM2D1Q9BX74 207 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 ELL3Q9HB65 397 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 RBMX2Q9Y388 322 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 NOP16Q9Y3C1 178 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 A0A1B0GUH1 482 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 MEIOCA2RUB1 952 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 ATP6V1G2-DDX39BF2Z307 99 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF780AO75290 641 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 PTAFRP25105 342 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 GCH1P30793 250 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 INPP1P49441 399 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 FABP6P51161 128 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 GNG3P63215 75 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 GPR176Q14439 515 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 RSU1Q15404 277 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 OR8G5Q8NG78 346 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 OR10R2Q8NGX6 335 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 WFIKKN1Q96NZ8 548 aa19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 C11orf54Q9H0W9 315 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-201ENST00000263121 HAAOP46952 286 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 MSMPQ1L6U9 139 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF57Q68EA5 555 aaPredicted RBP19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 GDPD3Q7L5L3 318 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 SAXO1Q8IYX7 474 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 GALNT11Q8NCW6 608 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 OR51F2Q8NH61 342 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 ADAT1Q9BUB4 502 aaKnown RBP19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 ERRFI1Q9UJM3 462 aaPredicted RBP19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 FZR1Q9UM11 496 aa19.55■□□□□ 0.72
SMARCB1-201ENST00000263121 PCNX1Q96RV3 2341 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 ORC5O43913 435 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF250P15622 560 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 GDNFP39905 211 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 RFX2P48378 723 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 ZNF260Q3ZCT1 412 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 SLC25A26Q70HW3 274 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 OR56B1Q8NGI3 324 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 AQP3Q92482 292 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 MICU1Q9BPX6 476 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 RTL8AQ9BWD3 113 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 SELENOIQ9C0D9 397 aa19.54■□□□□ 0.72
SMARCB1-201ENST00000263121 A0A1B0GWJ7 208 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 NKX2-6A6NCS4 301 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 DPRXA6NFQ7 191 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 FOXI3A8MTJ6 420 aaPredicted RBP19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 TIMM8AO60220 97 aaPredicted RBP19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 SSX4O60224 188 aa19.53■□□□□ 0.72
SMARCB1-201ENST00000263121 HTR3BO95264 441 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms