RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 IGKV3-11P04433 115 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 RBMXP38159 391 aaKnown RBP11.42□□□□□ -0.58
SNX1-201ENST00000261889 CAMLGP49069 296 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 DCDP81605 110 aaKnown RBP11.42□□□□□ -0.58
SNX1-201ENST00000261889 MYBPHQ13203 477 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 SLC43A2Q8N370 569 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 OR52M1Q8NGK5 317 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 CACFD1Q9UGQ2 172 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 PADI1Q9ULC6 663 aa11.42□□□□□ -0.58
SNX1-201ENST00000261889 CARHSP1Q9Y2V2 147 aaKnown RBP11.42□□□□□ -0.58
SNX1-201ENST00000261889 KIR2DS5A0A0G2JLQ3 304 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 A0A0G2JNG1 304 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 MEGF11A6BM72 1044 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 UMAD1C9J7I0 102 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 KIR2DS3K7RE56 304 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 KIR2DS5Q14953 304 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 GGNBP1Q5YKI7 109 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 UQCC3Q6UW78 93 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 ZDHHC22Q8N966 263 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 ZFP62Q8NB50 900 aaPredicted RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 OR2AJ1Q8NGZ0 328 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 SLC17A5Q9NRA2 495 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 SERINC1Q9NRX5 453 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 DOCK10Q96BY6 2186 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 FRG2CA6NGY1 282 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 ZNF850A8MQ14 1090 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 H3BP45 60 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 CSNK1EP49674 416 aaKnown RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 GRINAQ7Z429 371 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 LYPD6Q86Y78 171 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 TMEM156Q8N614 296 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 SLC38A9Q8NBW4 561 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 STT3BQ8TCJ2 826 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 RNF133Q8WVZ7 376 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 EDAQ92838 391 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 C1orf147Q96MC9 270 aaPredicted RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 SLCO5A1Q9H2Y9 848 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 TMEM100Q9NV29 134 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 ALG1L2C9J202 215 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 NUDT21O43809 227 aaKnown RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 CELA2AP08217 269 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 FCGR3AP08637 254 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 OR8U8P0C7N1 319 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 NDUFA6P56556 154 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 IGLV3-21P80748 117 aaPredicted RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 H1FNTQ75WM6 255 aaPredicted RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 OR56B1Q8NGI3 324 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 MAFAQ8NHW3 353 aaPredicted RBP11.41□□□□□ -0.58
SNX1-201ENST00000261889 LIPHQ8WWY8 451 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 TCTN2Q96GX1 697 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 PRDM6Q9NQX0 595 aa11.41□□□□□ -0.58
SNX1-201ENST00000261889 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.58
SNX1-201ENST00000261889 DOCK11Q5JSL3 2073 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 TMEM14DPA8MWL7 114 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 NPIPB7O75200 414 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 F10P00742 488 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 QDPRP09417 244 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 OR5AC1P0C628 307 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 TNFRSF4P43489 277 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 KISS1Q15726 138 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 IZUMO4Q1ZYL8 232 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 TMEM176BQ3YBM2 270 aaPredicted RBP11.4□□□□□ -0.58
SNX1-201ENST00000261889 ACTBL2Q562R1 376 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 FDX2Q6P4F2 183 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 ZNF565Q8N9K5 539 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 POC1AQ8NBT0 407 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 OR10G3Q8NGC4 313 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 TCEAL3Q969E4 200 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 MARS2Q96GW9 593 aaKnown RBP11.4□□□□□ -0.58
SNX1-201ENST00000261889 C2orf50Q96LR7 162 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 SMCO4Q9NRQ5 59 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 PLEKHJ1Q9NW61 149 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 FTCDNL1E5RQL4 147 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 TSPAN2O60636 221 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 GUSBP08236 651 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 H2AFB1P0C5Y9 115 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 FSTP19883 344 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 GSK3AP49840 483 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 RUNX1Q01196 453 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 UBE2V2Q15819 145 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 IGFBP7Q16270 282 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 GUK1Q16774 197 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 LINC00469Q8N7U9 141 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 FNDC9Q8TBE3 224 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 ZNF700Q9H0M5 742 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 OR10A2Q9H208 303 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 PRO1933Q9H354 126 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 CEP250Q9BV73 2442 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 ICE1Q9Y2F5 2266 aa11.4□□□□□ -0.58
SNX1-201ENST00000261889 MSTNO14793 375 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 CST7O76096 145 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 FBLP22087 321 aaKnown RBP11.39□□□□□ -0.59
SNX1-201ENST00000261889 PIGPP57054 158 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 TOMM20Q15388 145 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 LRP11Q86VZ4 500 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 OR9K2Q8NGE7 335 aa11.39□□□□□ -0.59
SNX1-201ENST00000261889 UBALD1Q8TB05 177 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms