RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 DOCK10Q96BY6 2186 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 DUX1O43812 170 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 MMP9P14780 707 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 ZNF84P51523 738 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 SLC25A1P53007 311 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 SHHQ15465 462 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 ZNF343Q6P1L6 599 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 MYO7BQ6PIF6 2116 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 C5orf24Q7Z6I8 188 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 S1PR5Q9H228 398 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 LPAR3Q9UBY5 353 aa8.96□□□□□ -0.97
PALB2-201ENST00000261584 PCNX1Q96RV3 2341 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 NLRC5Q86WI3 1866 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 A0A1W2PQF6 199 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 ZNF705FA8MVS1 300 aaPredicted RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 C3orf80F5H4A9 247 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 LYPD3O95274 346 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 ZNF705DP0CH99 300 aaPredicted RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 ZNF705BP0CI00 300 aaPredicted RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 B4GALT1P15291 398 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 HIST1H1DP16402 221 aaKnown RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 ZNF141Q15928 474 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 LPCAT3Q6P1A2 487 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 DHRS11Q6UWP2 260 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 BIVMQ86UB2 503 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 PLPP5Q8NEB5 264 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 OR8B12Q8NGG6 310 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 MEGF10Q96KG7 1140 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 SSX3Q99909 188 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 POLE3Q9NRF9 147 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 PLCE1Q9P212 2302 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 TUBAL3A6NHL2 446 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 ARF1P84077 181 aaKnown RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 IL10RAQ13651 578 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 ZNF658BQ4V348 819 aaPredicted RBP8.96□□□□□ -0.98
PALB2-201ENST00000261584 UNQ9370/PRO34162Q6UXP9 181 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 C1QL2Q7Z5L3 287 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 SLC22A18ASQ8N1D0 253 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 FBXL14Q8N1E6 418 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 NKAIN3Q8N8D7 197 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 PRRX2Q99811 253 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 NMNAT2Q9BZQ4 307 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 PLK3Q9H4B4 646 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 LIPGQ9Y5X9 500 aa8.96□□□□□ -0.98
PALB2-201ENST00000261584 CEBPZOSA8MTT3 80 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 PLPP3O14495 311 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 PPP1R2P9O14990 202 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 CYTIPO60759 359 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 IFNA5P01569 189 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 SERPINE2P07093 398 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 TGFBR3Q03167 851 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 C21orf62-AS1Q17RA5 79 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 THNSL2Q86YJ6 484 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 CPNE4Q96A23 557 aaPredicted RBP8.95□□□□□ -0.98
PALB2-201ENST00000261584 RARRES2Q99969 163 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 CALHM2Q9HA72 323 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 MMP26Q9NRE1 261 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 ICAM5Q9UMF0 924 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 ZSWIM8A7E2V4 1837 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 ZBTB25P24278 435 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 FZD2Q14332 565 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 CACNA1BQ00975 2339 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 TANC1Q9C0D5 1861 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 H0YIZ8 118 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 CDC14BO60729 498 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 TTRP02766 147 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 KIR2DL1P43626 348 aaPredicted RBP8.95□□□□□ -0.98
PALB2-201ENST00000261584 TAS2R46P59540 309 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 S100A12P80511 92 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 PMP22Q01453 160 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 ZNF239Q16600 458 aaKnown RBP8.95□□□□□ -0.98
PALB2-201ENST00000261584 SPINK9Q5DT21 86 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 PLXDC1Q8IUK5 500 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 LILRB1Q8NHL6 650 aaPredicted RBP8.95□□□□□ -0.98
PALB2-201ENST00000261584 SYT3Q9BQG1 590 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 OR14J1Q9UGF5 321 aa8.95□□□□□ -0.98
PALB2-201ENST00000261584 RAMP1O60894 148 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 NDUFS6O75380 124 aaKnown RBP8.94□□□□□ -0.98
PALB2-201ENST00000261584 ASAH2BP0C7U1 165 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 PPP1CCP36873 323 aaKnown RBP8.94□□□□□ -0.98
PALB2-201ENST00000261584 HLA-BQ31612 363 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 OR2T2Q6IF00 324 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 CATSPERDQ86XM0 798 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 C9orf40Q8IXQ3 194 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 OR1L3Q8NH93 324 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 PTRH2Q9Y3E5 179 aaKnown RBP8.94□□□□□ -0.98
PALB2-201ENST00000261584 TRBV5-5A0A0J9YX44 114 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 A0A1W2PPE3 182 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 SCRG1O75711 98 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 SFT2D2O95562 160 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 IGHV3-13P01766 116 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 IGHV3-7P01780 117 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 MMP7P09237 267 aaPredicted RBP8.94□□□□□ -0.98
PALB2-201ENST00000261584 CAPZBP47756 277 aa8.94□□□□□ -0.98
PALB2-201ENST00000261584 HNRNPKP61978 463 aaKnown RBP eCLIP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms