RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 CBLN4Q9NTU7 201 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 KIAA1456Q9P272 454 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 IL17BQ9UHF5 180 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 PILRAQ9UKJ1 303 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 NSG1A0A0A6YYJ2 146 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 IGLV1-36A0A0B4J1U3 117 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 EDDM13A0A1B0GTR0 161 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CLDN34H7C241 214 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 HSPB1P04792 205 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SLC35E2P0CK97 266 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 PGA3P0DJD8 388 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 THEGLP0DJG4 465 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ASCL1P50553 236 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TMEM50BP56557 158 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 INSM1Q01101 510 aaPredicted RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 MESP2Q0VG99 397 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 FZD2Q14332 565 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ICAM4Q14773 271 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 HNRNPA1L2Q32P51 320 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CHRFAM7AQ494W8 412 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 PLPP4Q5VZY2 271 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SPSB3Q6PJ21 355 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SLC35G3Q8N808 338 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 BCORP1Q8N888 145 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 OR5D14Q8NGL3 314 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 OR1P1Q8NH06 330 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 NPRL2Q8WTW4 380 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 VSTM2LQ96N03 204 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF558Q96NG5 402 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TIMM29Q9BSF4 260 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 TMEM106CQ9BVX2 250 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 S1PR5Q9H228 398 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CERS4Q9HA82 394 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 CENPMQ9NSP4 180 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 FBLN5Q9UBX5 448 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 AK3Q9UIJ7 227 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 SRPK3Q9UPE1 567 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 MRPS28Q9Y2Q9 187 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 INSL6Q9Y581 213 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 RFNGQ9Y644 331 aa6.38□□□□□ -1.39
CSDE1-201ENST00000261443 KIAA0100Q14667 2235 aaKnown RBP6.38□□□□□ -1.39
CSDE1-201ENST00000261443 GPR89AB7ZAQ6 455 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 PRRT4C9JH25 899 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 FOXS1O43638 330 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 PQBP1O60828 265 aaKnown RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 MMP7P09237 267 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 NPSP0C0P6 89 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CISD3P0C7P0 127 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 GPR89BP0CG08 455 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 BCKDHBP21953 392 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 GABRR1P24046 479 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 MMP16P51512 607 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 RPL27P61353 136 aaKnown RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 HNRNPKP61978 463 aaKnown RBP eCLIP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 NFATC4Q14934 902 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 ACKR1Q16570 336 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CBLN3Q6UW01 205 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 LINC00346Q8IVM7 164 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CARFQ8N187 725 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 KREMEN2Q8NCW0 462 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 OR4X1Q8NH49 305 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 HAS2Q92819 552 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 RERGQ96A58 199 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 TMEM59Q9BXS4 323 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 TCFL5Q9UL49 500 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 COA3Q9Y2R0 106 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CDC14BO60729 498 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 AHSA1O95433 338 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 METTL15P1P0C7V9 234 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF823P16415 610 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 RPL23AP62750 156 aaKnown RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 PAX5Q02548 391 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CD226Q15762 336 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 DCAF10Q5QP82 559 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 RNF144BQ7Z419 303 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CA13Q8N1Q1 262 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 SLC39A11Q8N1S5 342 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 KCNG3Q8TAE7 436 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 KIR3DX1Q9H7L2 352 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 PHPT1Q9NRX4 125 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 A0A1W2PP11 408 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 FAM230AA0A1W2PPH8 454 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 ZNF878C9JN71 531 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 TOX3O15405 576 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CRTAPO75718 401 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 CRYABP02511 175 aaKnown RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 BGLAPP02818 100 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 TK1P04183 234 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 IFI6P09912 130 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 H2BFMP0C1H6 154 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 OR4A8P0C604 315 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 OR5AC1P0C628 307 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 MNX1P50219 401 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-201ENST00000261443 ERVFC1-1P60608 527 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 TAF9Q16594 264 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 NKAIN1Q4KMZ8 207 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 C1orf189Q5VU69 101 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 P4HA3Q7Z4N8 544 aa6.37□□□□□ -1.39
CSDE1-201ENST00000261443 ARHGEF39Q8N4T4 335 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms