RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 ATP6V1FQ16864 119 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TMEM182Q6ZP80 229 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-201ENST00000261302 P4HA3Q7Z4N8 544 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 SGPP2Q8IWX5 399 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 C2orf73Q8N5S3 287 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-201ENST00000261302 LINC01555Q8NAE3 123 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 FGGYQ96C11 551 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 PARD6GQ9BYG4 376 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-201ENST00000261302 B3GAT1Q9P2W7 334 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 GRHPRQ9UBQ7 328 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TAC3Q9UHF0 121 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 ANAPC10Q9UM13 185 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 ZNF840PA6NDX5 716 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 E5RGE8 158 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TNFSF13O75888 250 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 ALOX5APP20292 161 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 MDKP21741 143 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TAF9Q16594 264 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 GPR157Q5UAW9 335 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 OR8G2PQ6IF36 304 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 C16orf54Q6UWD8 224 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TGIF2LYQ8IUE0 185 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 MAML2Q8IZL2 1156 aaPredicted RBP11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 HAS2Q92819 552 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TP53RKQ96S44 253 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TRIM2Q9C040 744 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 CTDSP1Q9GZU7 261 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 TM7SF3Q9NS93 570 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 P4HTMQ9NXG6 502 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 FLRT3Q9NZU0 649 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 NSG2Q9Y328 171 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 OBSL1O75147 1896 aa11.18□□□□□ -0.62
FOXN3-201ENST00000261302 A0A1B0GWA3 101 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 GPR137BO60478 399 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 CLEC3AO75596 197 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 PLAURQ03405 335 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 PRDX4Q13162 271 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 CSNK1A1LQ8N752 337 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 RHBDD1Q8TEB9 315 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 FAM46BQ96A09 425 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 COL26A1Q96A83 441 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 SLC35E1Q96K37 410 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 LANCL2Q9NS86 450 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 TAS2R4Q9NYW5 299 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 CDC14CA4D256 554 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 KAT7O95251 611 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 PI3P19957 117 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 ALDH3B1P43353 468 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 TFPI2P48307 235 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
FOXN3-201ENST00000261302 LINC00114Q6XXX2 140 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 LHFPL1Q86WI0 220 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 LYPD6Q86Y78 171 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 CHST4Q8NCG5 386 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 NUDT16L1Q9BRJ7 211 aaKnown RBP11.17□□□□□ -0.62
FOXN3-201ENST00000261302 KLF16Q9BXK1 252 aaPredicted RBP11.17□□□□□ -0.62
FOXN3-201ENST00000261302 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.17□□□□□ -0.622e-6■■■■■ 35.4
FOXN3-201ENST00000261302 SLC25A13Q9UJS0 675 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 DHDHQ9UQ10 334 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 RHBDD3Q9Y3P4 386 aa11.17□□□□□ -0.62
FOXN3-201ENST00000261302 LSM5Q9Y4Y9 91 aaKnown RBP11.17□□□□□ -0.62
FOXN3-201ENST00000261302 CDKN2AP42771 156 aaKnown RBP11.16□□□□□ -0.62
FOXN3-201ENST00000261302 VAMP2P63027 116 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 ZNF117Q03924 483 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 PLXDC2Q6UX71 529 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 ZNF66Q6ZN08 573 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 FNDC9Q8TBE3 224 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 ASB5Q8WWX0 329 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 OVCA2Q8WZ82 227 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 NKD1Q969G9 470 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 GPX7Q96SL4 187 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-201ENST00000261302 WDR76Q9H967 626 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 DOCK8Q8NF50 2099 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 DCDC2BA2VCK2 349 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 TMEM225BP0DP42 221 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 ZFP36L1Q07352 338 aaKnown RBP11.16□□□□□ -0.62
FOXN3-201ENST00000261302 ZNF880Q6PDB4 577 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 OR2L3Q8NG85 312 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 TBX15Q96SF7 602 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 ALKBH7Q9BT30 221 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-201ENST00000261302 C6orf106Q9H6K1 298 aaPredicted RBP11.16□□□□□ -0.62
FOXN3-201ENST00000261302 PLAGL1Q9UM63 463 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 TMEM14AQ9Y6G1 99 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 HEATR5BQ9P2D3 2071 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 VCANP13611 3396 aa11.16□□□□□ -0.62
FOXN3-201ENST00000261302 OPN1LWP04000 364 aa11.15□□□□□ -0.62
FOXN3-201ENST00000261302 ERGP11308 486 aa11.15□□□□□ -0.62
FOXN3-201ENST00000261302 HIST1H1TP22492 207 aaPredicted RBP11.15□□□□□ -0.62
FOXN3-201ENST00000261302 HOXC12P31275 282 aa11.15□□□□□ -0.62
FOXN3-201ENST00000261302 CTHP32929 405 aa11.15□□□□□ -0.62
FOXN3-201ENST00000261302 POLR2LP62875 67 aaKnown RBP11.15□□□□□ -0.62
FOXN3-201ENST00000261302 BATFQ16520 125 aa11.15□□□□□ -0.62
FOXN3-201ENST00000261302 PARM1Q6UWI2 310 aa11.15□□□□□ -0.62
FOXN3-201ENST00000261302 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms