RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZFPL1O95159 310 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 FAM122AQ96E09 287 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 RYDENQ9NUL5 291 aaKnown RBP16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 SLC17A2O00624 439 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 PRR35P0CG20 571 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 MPGP29372 298 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 MICBQ29980 383 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNF683Q8IZ20 524 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 EPHA8P29322 1005 aaPredicted RBP16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 PCBP4P57723 403 aaKnown RBP16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 SSX7Q7RTT5 188 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 NUP214P35658 2090 aaPredicted RBP16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 DOCK2Q92608 1830 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 FAM157AC9JC47 383 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 EML2O95834 649 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 IL11RAQ14626 422 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 TIGITQ495A1 244 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 PELI1Q96FA3 418 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 CDX2Q99626 313 aaPredicted RBP16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 DOK1Q99704 481 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 ARL2-SNX15V9GYD0 113 aa16.68■□□□□ 0.26
SMARCC1-201ENST00000254480 TAAR5O14804 337 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 DBX1A6NMT0 343 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 HTRA4P83105 476 aaPredicted RBP16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 OR5M8Q8NGP6 311 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 TMEM30CPA0ZSE6 113 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 CDC42EP2O14613 210 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 SPINK4O60575 86 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 CYTIPO60759 359 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 FUT3P21217 361 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 NXPH1P58417 271 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 CT55Q8WUE5 264 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNF768Q9H5H4 540 aaKnown RBP16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNF785A8K8V0 405 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 CTDSP1Q9GZU7 261 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 ICAM5Q9UMF0 924 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 TRIP11Q15643 1979 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 A0A1W2PPQ1 181 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 CTF1Q16619 201 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 SFTPA2Q8IWL1 248 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 EDARADDQ8WWZ3 215 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 PRR13Q9NZ81 148 aa16.67■□□□□ 0.26
SMARCC1-201ENST00000254480 COX5AP20674 150 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 GNG3P63215 75 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 C17orf47Q8NEP4 570 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 PLAC1Q9HBJ0 212 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 CD37P11049 281 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 CDK5Q00535 292 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 Q56UQ5 140 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 CTLA4P16410 223 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNF17P17021 662 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 BPIFB3P59826 476 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 FABP9Q0Z7S8 132 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 Q3ZCU0 254 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 BTNL3Q6UXE8 466 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 SLC38A6Q8IZM9 456 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 A0A1B0GUH1 482 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 RAB35Q15286 201 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 TMPRSS11FQ6ZWK6 438 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 OR6S1Q8NH40 331 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 BAP18Q8IXM2 172 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 SMIM4Q8WVI0 70 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 AKIP1Q9NQ31 210 aa16.66■□□□□ 0.26
SMARCC1-201ENST00000254480 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 TRAV1-2A0A0B4J238 106 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 AGFG2O95081 481 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 H3F3AP84243 136 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 OR2A2Q6IF42 318 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 C11orf42Q8N5U0 333 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 OR51I2Q9H344 312 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 NIT2Q9NQR4 276 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 FOXJ3Q9UPW0 622 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNF528Q3MIS6 628 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 OR2T6Q8NHC8 308 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 CORO2AQ92828 525 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 AKR1E2Q96JD6 320 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 ZFP64Q9NPA5 681 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 GVQW1Q8N7I0 195 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 MRGPRDQ8TDS7 321 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 LRRC29Q8WV35 223 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 NDFIP1Q9BT67 221 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 ZNHIT1O43257 154 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 ADAM20O43506 726 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 ADRB1P08588 477 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 GAMTQ14353 236 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 SSPNQ14714 243 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 DOK5Q9P104 306 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 PPIL1Q9Y3C6 166 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 NHSQ6T4R5 1651 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 RFPL4AA6NLU0 287 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 RFPL4AL1F8VTS6 287 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 CLEC9AQ6UXN8 241 aa16.65■□□□□ 0.26
SMARCC1-201ENST00000254480 SCN3AQ9NY46 2000 aa16.64■□□□□ 0.26
SMARCC1-201ENST00000254480 SCN7AQ01118 1682 aa16.64■□□□□ 0.26
SMARCC1-201ENST00000254480 OPRK1P41145 380 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 DHODHQ02127 395 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 PP6455Q8WZ26 134 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 G3V3Q6 166 aa16.64■□□□□ 0.25
SMARCC1-201ENST00000254480 ZBTB44Q8NCP5 570 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms