RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
VPS50-201ENST00000251739 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 TRPM8Q7Z2W7 1104 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 CPLX4Q7Z7G2 160 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 TMEM179BQ7Z7N9 219 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 DHFR2Q86XF0 187 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 ZDHHC23Q8IYP9 409 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 C17orf50Q8WW18 174 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 CFHR4Q92496 578 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 H1FXQ92522 213 aaKnown RBP8.4□□□□□ -1.06
VPS50-201ENST00000251739 ITFG2Q969R8 447 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 SDSLQ96GA7 329 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 OR51I2Q9H344 312 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 NIPAL2Q9H841 368 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 ELL3Q9HB65 397 aaPredicted RBP8.4□□□□□ -1.06
VPS50-201ENST00000251739 NLKQ9UBE8 527 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 DNAJB11Q9UBS4 358 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 LRP12Q9Y561 859 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 MAB21L2Q9Y586 359 aa8.4□□□□□ -1.06
VPS50-201ENST00000251739 A0A0U1RQV5 110 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 A0A1W2PRD5 423 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 A0A1W2PRF3 423 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 A0A1W2PRM7 423 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 PRR32B1ATL7 298 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 H3BUX3 64 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 ATP8B1O43520 1251 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 RAP2AP10114 183 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 PSG2P11465 335 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 PAICSP22234 425 aaKnown RBP8.39□□□□□ -1.07
VPS50-201ENST00000251739 GPM6AP51674 278 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 MNAT1P51948 309 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 GMFBP60983 142 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 FAM98BQ52LJ0 330 aaKnown RBP8.39□□□□□ -1.07
VPS50-201ENST00000251739 PLBD1Q6P4A8 553 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 ADGRG5Q8IZF4 528 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 C11orf42Q8N5U0 333 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 BBS1Q8NFJ9 593 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 PPP1R35Q8TAP8 253 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 GIPC3Q8TF64 312 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 AQP3Q92482 292 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 DUS3LQ96G46 650 aaKnown RBP8.39□□□□□ -1.07
VPS50-201ENST00000251739 RNF170Q96K19 258 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 FANCD2OSQ96PS1 177 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 OR51V1Q9H2C8 321 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 FAM206AQ9NX38 181 aa8.39□□□□□ -1.07
VPS50-201ENST00000251739 A0A1W2PQ09 198 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 ACOD1A6NK06 481 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 B2RBV5 119 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 PRR23D1E9PI22 279 aaPredicted RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 H3BN98 237 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 MTRF1O75570 445 aaKnown RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 PAHP00439 452 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 PRR23D2P0DMB1 279 aaPredicted RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 NDUFB7P17568 137 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 GLRA1P23415 457 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 GABRA5P31644 462 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 KIR2DS4P43632 304 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 GNG3P63215 75 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 CDK5Q00535 292 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 GINS1Q14691 196 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 HERPUD1Q15011 391 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 CEACAM21Q3KPI0 293 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 SLC35D3Q5M8T2 416 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 DEGS2Q6QHC5 323 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 CPOQ8IVL8 374 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 ZNRF1Q8ND25 227 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 PAPD5Q8NDF8 572 aaKnown RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 OR5D13Q8NGL4 314 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 OR5K1Q8NHB7 308 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 FAM110DQ8TAY7 271 aaPredicted RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 FBLIM1Q8WUP2 373 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 PIGCQ92535 297 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 ASB9Q96DX5 294 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 MEGF9Q9H1U4 602 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 PPA2Q9H2U2 334 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 RANBP3Q9H6Z4 567 aaPredicted RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 C19orf12Q9NSK7 152 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 TAS2R1Q9NYW7 299 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 NUFIP1Q9UHK0 495 aaKnown RBP8.38□□□□□ -1.07
VPS50-201ENST00000251739 SIGLEC9Q9Y336 463 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 COL7A1Q02388 2944 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 NBEAL2Q6ZNJ1 2754 aa8.38□□□□□ -1.07
VPS50-201ENST00000251739 OR5B21A6NL26 309 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 ZNF732B4DXR9 585 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 CHST1O43916 411 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 OPN1MWP04001 364 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 CSF1P09603 554 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 OPN1MW2P0DN77 364 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 OPN1MW3P0DN78 364 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 T-ENOLP0DO92 83 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 ATP6V1B1P15313 513 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 GYS2P54840 703 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 ROM1Q03395 351 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 LRRC75BQ2VPJ9 315 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 ZBTB37Q5TC79 503 aa8.37□□□□□ -1.07
VPS50-201ENST00000251739 TMEM42Q69YG0 159 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms