RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 TNFRSF14Q92956 283 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 FGF23Q9GZV9 251 aaPredicted RBP17.27■□□□□ 0.36
NEDD8-201ENST00000250495 SEMA6AQ9H2E6 1030 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 MMP27Q9H306 513 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 OR51I2Q9H344 312 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 METTL8Q9H825 291 aaKnown RBP17.27■□□□□ 0.36
NEDD8-201ENST00000250495 SLC25A19Q9HC21 320 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 VPREB3Q9UKI3 123 aa17.27■□□□□ 0.36
NEDD8-201ENST00000250495 HCCSP53701 268 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 PROK1P58294 105 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 KRTAP10-3P60369 221 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 RIPPLY1Q0D2K3 151 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 MIDNQ504T8 468 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 TMEM236Q5W0B7 351 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 DHRS7BQ6IAN0 325 aaPredicted RBP17.26■□□□□ 0.35
NEDD8-201ENST00000250495 Q6ZSV7 163 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 HS3ST5Q8IZT8 346 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 OR5R1Q8NH85 324 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 TEAD3Q99594 435 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 C16orf95Q9H693 158 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 TVP23BQ9NYZ1 205 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 DNAJB9Q9UBS3 223 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 TMEM14AQ9Y6G1 99 aa17.26■□□□□ 0.35
NEDD8-201ENST00000250495 A0A1W2PRD5 423 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 A0A1W2PRF3 423 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 A0A1W2PRM7 423 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 MEIOCA2RUB1 952 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 ZNF254O75437 659 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 RHBDL1O75783 438 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 TGFBR2P37173 567 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 PRB3Q04118 309 aaPredicted RBP17.25■□□□□ 0.35
NEDD8-201ENST00000250495 ACSM1Q08AH1 577 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 CEP78Q5JTW2 689 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 LCN1P1Q5VSP4 162 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 ASPHD2Q6ICH7 369 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 SPATA24Q86W54 205 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 COMMD2Q86X83 199 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 ASB17Q8WXJ9 295 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 DNAJC9Q8WXX5 260 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 DUS3LQ96G46 650 aaKnown RBP17.25■□□□□ 0.35
NEDD8-201ENST00000250495 PBOV1Q9GZY1 135 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 TCF7L1Q9HCS4 588 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 FAM206AQ9NX38 181 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 RASL12Q9NYN1 266 aa17.25■□□□□ 0.35
NEDD8-201ENST00000250495 OR5B21A6NL26 309 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 PSMD9O00233 223 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 TSPAN9O75954 239 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 TFF1P04155 84 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 PSG2P11465 335 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 SAA4P35542 130 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 DLX1P56177 255 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 KLRD1Q13241 179 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 FLOT2Q14254 428 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 RCN1Q15293 331 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 ZBTB37Q5TC79 503 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 MOB3CQ70IA8 216 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 ZNF679Q8IYX0 411 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 OR5D13Q8NGL4 314 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 NRBF2Q96F24 287 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 RBM4BQ9BQ04 359 aaKnown RBP17.24■□□□□ 0.35
NEDD8-201ENST00000250495 NKX1-2Q9UD57 310 aaPredicted RBP17.24■□□□□ 0.35
NEDD8-201ENST00000250495 POMPQ9Y244 141 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 SF3B6Q9Y3B4 125 aaKnown RBP17.24■□□□□ 0.35
NEDD8-201ENST00000250495 MAB21L2Q9Y586 359 aa17.24■□□□□ 0.35
NEDD8-201ENST00000250495 IGKV1D-17A0A075B6S4 117 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 TRBV23-1A0A0A0MS06 115 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 MTRF1O75570 445 aaKnown RBP17.23■□□□□ 0.35
NEDD8-201ENST00000250495 RIDAP52758 137 aaKnown RBP17.23■□□□□ 0.35
NEDD8-201ENST00000250495 CRISP1P54107 249 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 ROM1Q03395 351 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 ZNF829Q3KNS6 432 aaPredicted RBP17.23■□□□□ 0.35
NEDD8-201ENST00000250495 ZNRF1Q8ND25 227 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 TMEM185AQ8NFB2 350 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 AQP3Q92482 292 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 UBE2FQ969M7 185 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 OR8B4Q96RC9 309 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 GPR84Q9NQS5 396 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 ENPP5Q9UJA9 477 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 ZNF222Q9UK12 451 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 PIGLQ9Y2B2 252 aa17.23■□□□□ 0.35
NEDD8-201ENST00000250495 ANKRD61A6NGH8 418 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 H0YAE9 185 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 MRPL3P09001 348 aaKnown RBP17.22■□□□□ 0.35
NEDD8-201ENST00000250495 SLC34A1Q06495 639 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 PLCXD3Q63HM9 321 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 HAGHLQ6PII5 290 aaPredicted RBP17.22■□□□□ 0.35
NEDD8-201ENST00000250495 PNKDQ8N490 385 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 BEND2Q8NDZ0 799 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 OR51E1Q8TCB6 317 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 SDSLQ96GA7 329 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 FAM234AQ9H0X4 552 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 PAPOLBQ9NRJ5 636 aaKnown RBP17.22■□□□□ 0.35
NEDD8-201ENST00000250495 NUFIP1Q9UHK0 495 aaKnown RBP17.22■□□□□ 0.35
NEDD8-201ENST00000250495 CMYA5Q8N3K9 4069 aa17.22■□□□□ 0.35
NEDD8-201ENST00000250495 IGLV3-1P01715 115 aa17.21■□□□□ 0.35
NEDD8-201ENST00000250495 CAPZA1P52907 286 aa17.21■□□□□ 0.35
NEDD8-201ENST00000250495 ZNF684Q5T5D7 378 aa17.21■□□□□ 0.35
NEDD8-201ENST00000250495 PRRG3Q9BZD7 231 aa17.21■□□□□ 0.35
NEDD8-201ENST00000250495 H2AFY2Q9P0M6 372 aaPredicted RBP17.21■□□□□ 0.35
NEDD8-201ENST00000250495 IKZF2Q9UKS7 526 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms