RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 HIST1H1DP16402 221 aaKnown RBP14.92□□□□□ -0.02
FOXA1-201ENST00000250448 FPR2P25090 351 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 PTGDSP41222 190 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 HSF1Q00613 529 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 H1FNTQ75WM6 255 aaPredicted RBP14.92□□□□□ -0.02
FOXA1-201ENST00000250448 TMEM104Q8NE00 496 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 DMBX1Q8NFW5 382 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 OR10S1Q8NGN2 331 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 RXFP4Q8TDU9 374 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 SAT2Q96F10 170 aaPredicted RBP14.92□□□□□ -0.02
FOXA1-201ENST00000250448 CPNE2Q96FN4 548 aaPredicted RBP14.92□□□□□ -0.02
FOXA1-201ENST00000250448 TMEM41AQ96HV5 264 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 ARL5BQ96KC2 179 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 CMSS1Q9BQ75 279 aaKnown RBP14.92□□□□□ -0.02
FOXA1-201ENST00000250448 PCDHGA1Q9Y5H4 931 aa14.92□□□□□ -0.02
FOXA1-201ENST00000250448 ZFHX4Q86UP3 3567 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 SOCS1O15524 211 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 PI3P19957 117 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 NFYBP25208 207 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 ANKRD55Q3KP44 614 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 TMEM234Q8WY98 164 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 SMIM8Q96KF7 97 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 PPP4R1LQ9P1A2 415 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 IL17BQ9UHF5 180 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 NPIPB13A6NJU9 1138 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 NPIPB4C9JG80 1138 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 GLAP06280 429 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 SUPT4H1P63272 117 aaKnown RBP14.91□□□□□ -0.02
FOXA1-201ENST00000250448 EXT1Q16394 746 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 TMEM200AQ86VY9 491 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 OR51F2Q8NH61 342 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 OR51E1Q8TCB6 317 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 SLC5A7Q9GZV3 580 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 CHST11Q9NPF2 352 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 CDC14BO60729 498 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 CSTBP04080 98 aaKnown RBP14.91□□□□□ -0.02
FOXA1-201ENST00000250448 MEOX2P50222 304 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 CAV2P51636 162 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 TLE3Q04726 772 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 C17orf67Q0P5P2 114 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 TGIF1Q15583 401 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 PEG10Q86TG7 708 aaKnown RBP14.91□□□□□ -0.02
FOXA1-201ENST00000250448 OR5H2Q8NGV7 314 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 MFSD8Q8NHS3 518 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 C2CD4CQ8TF44 421 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 C1orf147Q96MC9 270 aaPredicted RBP14.91□□□□□ -0.02
FOXA1-201ENST00000250448 P4HTMQ9NXG6 502 aa14.91□□□□□ -0.02
FOXA1-201ENST00000250448 MED13Q9UHV7 2174 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 MEX3AA1L020 520 aaKnown RBP14.9□□□□□ -0.02
FOXA1-201ENST00000250448 RAD51DO75771 328 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 DKK1O94907 266 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 CYC1P08574 325 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 KCNJ3P48549 501 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 RAB32Q13637 225 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 RPS19BP1Q86WX3 136 aaKnown RBP14.9□□□□□ -0.02
FOXA1-201ENST00000250448 SKA3Q8IX90 412 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 OR5AS1Q8N127 324 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 POC1AQ8NBT0 407 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 OR10C1Q96KK4 312 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 C2orf50Q96LR7 162 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 C5orf34Q96MH7 638 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 SCGB3A2Q96PL1 93 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 BANF2Q9H503 90 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 DNAJB11Q9UBS4 358 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 WIF1Q9Y5W5 379 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 CHCHD2Q9Y6H1 151 aaPredicted RBP14.9□□□□□ -0.02
FOXA1-201ENST00000250448 PET100P0DJ07 73 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 CCL3P10147 92 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 OR3A4PP47883 348 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 SSTP61278 116 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 S100A12P80511 92 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 FAM219AQ8IW50 185 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 KCNG3Q8TAE7 436 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 M1APQ8TC57 530 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 CYYR1Q96J86 154 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 RTBDNQ9BSG5 229 aaPredicted RBP14.9□□□□□ -0.02
FOXA1-201ENST00000250448 TMEM59Q9BXS4 323 aa14.9□□□□□ -0.02
FOXA1-201ENST00000250448 METTL8Q9H825 291 aaKnown RBP14.9□□□□□ -0.02
FOXA1-201ENST00000250448 IFNA4P05014 189 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 AMY2BP19961 511 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 LPAR6P43657 344 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 BIDP55957 195 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 FOXF1Q12946 379 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 ZFP82Q8N141 532 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 TMEM156Q8N614 296 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 OR13G1Q8NGZ3 307 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 SLC39A7Q92504 469 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 EMC6Q9BV81 110 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 LRP3O75074 770 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 SFTA3P0C7M3 94 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 EIF5AP63241 154 aaKnown RBP14.89□□□□□ -0.03
FOXA1-201ENST00000250448 COMMD2Q86X83 199 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 SFT2D1Q8WV19 159 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 ST8SIA1Q92185 356 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 MOB1AQ9H8S9 216 aa14.89□□□□□ -0.03
FOXA1-201ENST00000250448 ANKUB1A6NFN9 424 aa14.88□□□□□ -0.03
FOXA1-201ENST00000250448 RNASEK-C17orf49H0YIS7 233 aa14.88□□□□□ -0.03
FOXA1-201ENST00000250448 H3BML4 177 aa14.88□□□□□ -0.03
FOXA1-201ENST00000250448 MFNGO00587 321 aa14.88□□□□□ -0.03
FOXA1-201ENST00000250448 MED6O75586 246 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms