RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 RPS2P15880 293 aaKnown RBP14.37□□□□□ -0.11
HOXD3-201ENST00000249440 GALNTL5Q7Z4T8 443 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 TMEM156Q8N614 296 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 PIGQQ9BRB3 760 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 AIFM2Q9BRQ8 373 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 PLEKHJ1Q9NW61 149 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 OR5AC2Q9NZP5 309 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 MEMO1Q9Y316 297 aa14.37□□□□□ -0.11
HOXD3-201ENST00000249440 TMEM218A2RU14 115 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 DBHP09172 617 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 ARHGDIBP52566 201 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 SUCLG1P53597 346 aaKnown RBP14.36□□□□□ -0.11
HOXD3-201ENST00000249440 RAC1P63000 192 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 FAM27BQ5VT28 67 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 SLC39A1Q9NY26 324 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 DNAJB11Q9UBS4 358 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 CNTRLQ7Z7A1 2325 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 MSGN1A6NI15 193 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 C9J4A7 227 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 ATP6V1G2-DDX39BF2Z307 99 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 CBR3O75828 277 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 KNG1P01042 644 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 SERPINA5P05154 406 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 MRPS34P82930 218 aaKnown RBP14.36□□□□□ -0.11
HOXD3-201ENST00000249440 RAB32Q13637 225 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 STK11Q15831 433 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 SDK2Q58EX2 2172 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 ZNF585AQ6P3V2 769 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 C6orf201Q7Z4U5 140 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 DTX1Q86Y01 620 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 SEMA6DQ8NFY4 1073 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 TMED6Q8WW62 240 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 ARL11Q969Q4 196 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 FBXO17Q96EF6 278 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 MICU1Q9BPX6 476 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 HPF1Q9NWY4 346 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 PILRBQ9UKJ0 227 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 HS3ST3B1Q9Y662 390 aa14.36□□□□□ -0.11
HOXD3-201ENST00000249440 GJE1A6NN92 205 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 TNFSF11O14788 317 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 KLF7O75840 302 aaPredicted RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 CSTBP04080 98 aaKnown RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 GABRR1P24046 479 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 MTCP1P56278 107 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 ZNF169Q14929 603 aaPredicted RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 ZIC4Q8N9L1 334 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 POC1AQ8NBT0 407 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 SGK3Q96BR1 496 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 TSNAXQ99598 290 aaKnown RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 SH2D2AQ9NP31 389 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 C1orf123Q9NWV4 160 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 GSKIPQ9P0R6 139 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 A0A0J9YW62 118 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 DHRS7CA6NNS2 312 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 G3V3Y1 287 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 TSPAN9O75954 239 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 PLATP00750 562 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 IFNA2P01563 188 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 HOXB5P09067 269 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 TMEM225BP0DP42 221 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 IL15RAQ13261 267 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 SNAI3Q3KNW1 292 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 PDSS1Q5T2R2 415 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 DRAM2Q6UX65 266 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 RPS19BP1Q86WX3 136 aaKnown RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 C20orf196Q8IYI0 205 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 SVBPQ8N300 66 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 CLRN3Q8NCR9 226 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 BHLHE23Q8NDY6 225 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 SPSB1Q96BD6 273 aa14.35□□□□□ -0.11
HOXD3-201ENST00000249440 CPNE2Q96FN4 548 aaPredicted RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 SF3B5Q9BWJ5 86 aaKnown RBP14.35□□□□□ -0.11
HOXD3-201ENST00000249440 RRP8O43159 456 aaKnown RBP14.34□□□□□ -0.11
HOXD3-201ENST00000249440 RBMXP38159 391 aaKnown RBP14.34□□□□□ -0.11
HOXD3-201ENST00000249440 EIF5AP63241 154 aaKnown RBP14.34□□□□□ -0.11
HOXD3-201ENST00000249440 PMS2CLQ68D20 193 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 TMEM105Q8N8V8 129 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 AGBL5Q8NDL9 886 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 OR5T2Q8NGG2 359 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 NTNG2Q96CW9 530 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 Q96M66 194 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 ZNF2Q9BSG1 426 aaPredicted RBP14.34□□□□□ -0.11
HOXD3-201ENST00000249440 METTL9Q9H1A3 318 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 MCTS1Q9ULC4 181 aaKnown RBP14.34□□□□□ -0.11
HOXD3-201ENST00000249440 EDARQ9UNE0 448 aa14.34□□□□□ -0.11
HOXD3-201ENST00000249440 TAAR5O14804 337 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 SGCEO43556 437 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 DNPH1O43598 174 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 FAM157CP0CG43 387 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 AKR1C2P52895 323 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 S100A10P60903 97 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 AKR1C1Q04828 323 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 RPUSD3Q6P087 351 aaKnown RBP14.33□□□□□ -0.11
HOXD3-201ENST00000249440 PLXDC2Q6UX71 529 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 SULF2Q8IWU5 870 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 SGPP2Q8IWX5 399 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 OR51F2Q8NH61 342 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 ZNF837Q96EG3 531 aaPredicted RBP14.33□□□□□ -0.11
HOXD3-201ENST00000249440 SLC5A7Q9GZV3 580 aa14.33□□□□□ -0.11
HOXD3-201ENST00000249440 GPR173Q9NS66 373 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms