RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 METRNLQ641Q3 311 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ATOH7Q8N100 152 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ZNF799Q96GE5 643 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ADGRG7Q96K78 797 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ATP5SQ99766 215 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 GINS3Q9BRX5 216 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 OR5AC1P0C628 307 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SLC35E2P0CK97 266 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 VSIG10L2P0DP72 767 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 UBE2G1P62253 170 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 PCK2Q16822 640 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 WDR25Q64LD2 544 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 FUT9Q9Y231 359 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CCDC168Q8NDH2 2452 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 LINC01565O15544 149 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ZNF133P52736 654 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 GAMTQ14353 236 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 Q6ZN92 141 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ARIH2OSQ8N7S6 290 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 OR10G3Q8NGC4 313 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 LRFN3Q9BTN0 628 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ACTR3CQ9C0K3 210 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 IGLV3-10A0A075B6K4 115 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 PRSS37A4D1T9 235 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 A8MVM7 634 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 FFAR1O14842 300 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 RPL24P83731 157 aaKnown RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 CLEC18AA5D8T8 446 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CLN3Q13286 438 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 TOMM34Q15785 309 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 CLEC18CQ8NCF0 446 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 TET1Q8NFU7 2136 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SEH1LQ96EE3 360 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 C19orf53Q9UNZ5 99 aaPredicted RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 LOC102723971A0A1B0GUV8 181 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 E5RGE8 158 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 TBXA2RP21731 343 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 PCBD1P61457 104 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 TUSC1Q2TAM9 212 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 PLA2G3Q9NZ20 509 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 NSG2Q9Y328 171 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ENTPD2Q9Y5L3 495 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ABCD4O14678 606 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 ZFPL1O95159 310 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CDKN2AP42771 156 aaKnown RBP6.74□□□□□ -1.33
RIF1-201ENST00000243326 FBXL14Q8N1E6 418 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 STPG2Q8N412 459 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 J3KRW8 73 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 RER1O15258 196 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 F2RP25116 425 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CCR2P41597 374 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 HAAOP46952 286 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 CAMPP49913 170 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SPSB2Q99619 263 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SOCS1O15524 211 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 SSR4P51571 173 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 POLR2GP62487 172 aaKnown RBP eCLIP6.74□□□□□ -1.33
RIF1-201ENST00000243326 OR5M9Q8NGP3 310 aa6.74□□□□□ -1.33
RIF1-201ENST00000243326 DOCK6Q96HP0 2047 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 CA6P23280 308 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 INSM1Q01101 510 aaPredicted RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 WDR5BQ86VZ2 330 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 NTNG2Q96CW9 530 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 PLEKHF2Q9H8W4 249 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 CHRNA9Q9UGM1 479 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 S100A8P05109 93 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 Q1RN00 199 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 DHRS7BQ6IAN0 325 aaPredicted RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 OR5D13Q8NGL4 314 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 CMTM2Q8TAZ6 248 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 IFI44Q8TCB0 444 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 STACQ99469 402 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 EDEM2Q9BV94 578 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 TXNIPQ9H3M7 391 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 DICER1Q9UPY3 1922 aaKnown RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 DCDP81605 110 aaKnown RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 EXD3Q8N9H8 876 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 VN1R17PQ8TDU5 208 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 RAB33BQ9H082 229 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 GPR12P47775 334 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 TMEM33P57088 247 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 PPP1CBP62140 327 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 OR1L6Q8NGR2 347 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 OR5C1Q8NGR4 320 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 EID2BQ96D98 161 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 SLX4Q8IY92 1834 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 GALR3O60755 368 aaPredicted RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 CBR3O75828 277 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 UQCC1Q9NVA1 299 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 VSTM5A8MXK1 200 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ZNF732B4DXR9 585 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 HEXAP06865 529 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 PRR35P0CG20 571 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 HRKO00198 91 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 CDK2AP1O14519 115 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ASB16Q96NS5 453 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 SCN5AQ14524 2016 aa6.73□□□□□ -1.33
RIF1-201ENST00000243326 ZFC3H1O60293 1989 aaKnown RBP6.73□□□□□ -1.33
RIF1-201ENST00000243326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms