RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CADM3Q8N126 398 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 RELL2Q8NC24 303 aaPredicted RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 STEAP2Q8NFT2 490 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 RNF170Q96K19 258 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 URM1Q9BTM9 101 aaKnown RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ELL3Q9HB65 397 aaPredicted RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 MRPL15Q9P015 296 aaKnown RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 NLKQ9UBE8 527 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ELF5Q9UKW6 265 aaPredicted RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 MPC1Q9Y5U8 109 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 IGHV2OR16-5A0A0B4J2B6 119 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 IGKV1-12A0A0C4DH73 117 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 FAM240BA0A1B0GVZ2 78 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 ANKRD30BLA7E2S9 258 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 SULT1C2O00338 296 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 SOCS1O15524 211 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 PLATP00750 562 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 IGKV1D-12P01611 117 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 MELTFP08582 738 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 SERPINA2P20848 420 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 RAD52P43351 418 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 SNTB2Q13425 540 aaKnown RBP13.05□□□□□ -0.32
HDHD3-201ENST00000238379 LY6DQ14210 128 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 CDNFQ49AH0 187 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 CALHM1Q8IU99 346 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 ST6GALNAC3Q8NDV1 305 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 PXT1Q8NFP0 134 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 MARS2Q96GW9 593 aaKnown RBP13.05□□□□□ -0.32
HDHD3-201ENST00000238379 C7orf50Q9BRJ6 194 aaKnown RBP13.05□□□□□ -0.32
HDHD3-201ENST00000238379 TM2D1Q9BX74 207 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 SELENOIQ9C0D9 397 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 ACTR6Q9GZN1 396 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 METTL9Q9H1A3 318 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 SCPEP1Q9HB40 452 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 ELOVL5Q9NYP7 299 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 PKD1L2Q7Z442 2459 aa13.05□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM235A6NFC5 223 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 CENPXA8MT69 81 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 FOXI3A8MTJ6 420 aaPredicted RBP13.04□□□□□ -0.32
HDHD3-201ENST00000238379 LPLP06858 475 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 GSTT2BP0CG30 244 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 CALCRP30988 508 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 CCKARP32238 428 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM50BP56557 158 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 AP3S2P59780 193 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 C3orf36Q3SXR2 165 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PLA1AQ53H76 456 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PLAC9Q5JTB6 97 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 C1QTNF12Q5T7M4 302 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 UNQ6126/PRO20091Q6UXV3 157 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 Q6ZTK2 550 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 RTN4RL2Q86UN3 420 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 CHST4Q8NCG5 386 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 OR56B1Q8NGI3 324 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 OR5A2Q8NGI9 324 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 KLF14Q8TD94 323 aaPredicted RBP13.04□□□□□ -0.32
HDHD3-201ENST00000238379 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 RND1Q92730 232 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 NPAP1Q9NZP6 1156 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 MEMO1Q9Y316 297 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TPRP12270 2363 aaKnown RBP13.04□□□□□ -0.32
HDHD3-201ENST00000238379 SHANK1Q9Y566 2161 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TRGV8A0A0C4DH27 118 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PFDN1O60925 122 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TUBG1P23258 451 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 ZNF83P51522 516 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 GPM6AP51674 278 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 NAAAQ02083 359 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 SSBP1Q04837 148 aaKnown RBP13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PSG7Q13046 419 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PPA1Q15181 289 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 RSU1Q15404 277 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM255AQ5JRV8 349 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM211Q6ICI0 200 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PLET1Q6UQ28 207 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 C22orf34Q6ZV56 151 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 OR51T1Q8NGJ9 327 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 DVL3Q92997 716 aaPredicted RBP13.04□□□□□ -0.32
HDHD3-201ENST00000238379 RAB3CQ96E17 227 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 HIST1H2AAQ96QV6 131 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 HRASLSQ9HDD0 168 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 TUBG2Q9NRH3 451 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 IL36GQ9NZH8 169 aa13.04□□□□□ -0.32
HDHD3-201ENST00000238379 PCNX1Q96RV3 2341 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 MEIS3P1A6NDR6 274 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 IQCF6A8MYZ5 107 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 ZNF732B4DXR9 585 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 ZNF780AO75290 641 aaPredicted RBP13.03□□□□□ -0.32
HDHD3-201ENST00000238379 MT-ND4P03905 459 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 GNB3P16520 340 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 CA6P23280 308 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 MPV17P39210 176 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 CA7P43166 264 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 ALKBH6Q3KRA9 238 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 PCSK4Q6UW60 755 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 SEZ6L2Q6UXD5 910 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 ZNF611Q8N823 705 aa13.03□□□□□ -0.32
HDHD3-201ENST00000238379 ZSCAN4Q8NAM6 433 aaPredicted RBP13.03□□□□□ -0.32
HDHD3-201ENST00000238379 OR51F2Q8NH61 342 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms