RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 NTN1O95631 604 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 C1QCP02747 245 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 ENPP1P22413 925 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 THBS4P35443 961 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PLGLAQ15195 96 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 CDKN3Q16667 212 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 SYT13Q7L8C5 426 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 UBE3DQ7Z6J8 389 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 DNAJB12Q9NXW2 375 aaKnown RBP12.35□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF814B7Z6K7 855 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF737O75373 536 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 DMRTC1Q5HYR2 192 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 CD200R1LQ6Q8B3 271 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 OSR2Q8N2R0 312 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 OR2T10Q8NGZ9 312 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PBX4Q9BYU1 374 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 TMEM9BQ9NQ34 198 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 FRRS1LQ9P0K9 344 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 NAT8Q9UHE5 227 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 DUXBA0A1W2PPF3 345 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 BCAT2O15382 392 aaPredicted RBP12.35□□□□□ -0.43
HCFC2-201ENST00000229330 OR10J1P30954 320 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 CCR2P41597 374 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 P2RY1P47900 373 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PRAMEF5Q5TYX0 476 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 RHBDD1Q8TEB9 315 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PPIL1Q9Y3C6 166 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PTRH2Q9Y3E5 179 aaKnown RBP12.35□□□□□ -0.43
HCFC2-201ENST00000229330 NKX2-2O95096 273 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF17P17021 662 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 GABRA4P48169 554 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 BSXQ3C1V8 233 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 PABPC1L2AQ5JQF8 200 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 RHOVQ96L33 236 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 DUSP23Q9BVJ7 150 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TPPP3Q9BW30 176 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TLNRD1Q9H1K6 362 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 CHEK1O14757 476 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 PRKNO60260 465 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF770Q6IQ21 691 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 PTCRAQ6ISU1 281 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 FAM174AQ8TBP5 190 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 C11orf40Q8WZ69 217 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ST8SIA1Q92185 356 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 MASP2O00187 686 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ERVFC1-1P60608 527 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 MLF2Q15773 248 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 Q6ZN92 141 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ST6GALNAC2Q9UJ37 374 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 NOSIPQ9Y314 301 aaKnown RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 XIRP1Q702N8 1843 aaKnown RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ADAM20O43506 726 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 HEXAP06865 529 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TMIGD3P0DMS9 266 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 USF1P22415 310 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 FKBP2P26885 142 aaKnown RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 DDTP30046 118 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 CHRNA7P36544 502 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 FOXK1P85037 733 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 SHBQ15464 509 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 C17orf78Q8N4C9 275 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 PP6455Q8WZ26 134 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ERGIC1Q969X5 290 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 EFSO43281 561 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 CDC14BO60729 498 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 FAHP16930 419 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 FOLR3P41439 243 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 SURF2Q15527 256 aaPredicted RBP12.34□□□□□ -0.43
HCFC2-201ENST00000229330 ABHD17BQ5VST6 288 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 RABEPKQ7Z6M1 372 aa12.34□□□□□ -0.43
HCFC2-201ENST00000229330 TAS2R45P59539 299 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 ABLIM2Q6H8Q1 611 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 ADGRG7Q96K78 797 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 TSPAN32Q96QS1 320 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 SPINT2O43291 252 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 EDN3P14138 238 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 RAB35Q15286 201 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 CORO2AQ92828 525 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 SEC11BP0C7V7 166 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 LIMK1P53667 647 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 S100A7AQ86SG5 101 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 ADAD2Q8NCV1 583 aaKnown RBP12.33□□□□□ -0.44
HCFC2-201ENST00000229330 WNT2BQ93097 391 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 ZNF764Q96H86 408 aaPredicted RBP12.33□□□□□ -0.44
HCFC2-201ENST00000229330 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 OR13H1Q8NG92 308 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 RDH5Q92781 318 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 NAT8BQ9UHF3 227 aa12.33□□□□□ -0.44
HCFC2-201ENST00000229330 CTSDP07339 412 aaPredicted RBP12.32□□□□□ -0.44
HCFC2-201ENST00000229330 HAAOP46952 286 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms