RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NKX6-1P78426 367 aaPredicted RBP12.43□□□□□ -0.42
SF1-201ENST00000227503 ARFRP1Q13795 201 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 C1orf100Q5SVJ3 147 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 KIAA0895LQ68EN5 471 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 DCXRQ7Z4W1 244 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 C1QL4Q86Z23 238 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 FRZBQ92765 325 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 ARHGAP5-AS1Q96IT6 56 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 THOC3Q96J01 351 aaKnown RBP12.43□□□□□ -0.42
SF1-201ENST00000227503 ZNF107Q9UII5 783 aaPredicted RBP12.43□□□□□ -0.42
SF1-201ENST00000227503 POMT1Q9Y6A1 747 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 OR5H1A6NKK0 313 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 BGLAPP02818 100 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 HEXBP07686 556 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 CAPZBP47756 277 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 RGS19P49795 217 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 SLC26A5P58743 744 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 SLC35A1P78382 337 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 OR5H2Q8NGV7 314 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 SNX22Q96L94 193 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 TMEM68Q96MH6 324 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 PRRX2Q99811 253 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 G6PC2Q9NQR9 355 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 LANCL2Q9NS86 450 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 EHFQ9NZC4 300 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 MMP17Q9ULZ9 603 aa12.43□□□□□ -0.42
SF1-201ENST00000227503 H3BQ15 152 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 DANCRP0C864 163 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 TRGC1P0CF51 173 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 PET100P0DJ07 73 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 SLC2A1P11166 492 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 HLA-DOBP13765 273 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 MPZP25189 248 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 LBX1P52954 281 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 QRFPP83859 136 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 NHLH2Q02577 135 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 ACY1Q03154 408 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 ZNF117Q03924 483 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 UBE2V2Q15819 145 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 FDX2Q6P4F2 183 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 WDFY1Q8IWB7 410 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 ADOQ96SZ5 270 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 NEU1Q99519 415 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 PNO1Q9NRX1 252 aaKnown RBP12.42□□□□□ -0.42
SF1-201ENST00000227503 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 HSPB2A8KAH6 182 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 TAAR5O14804 337 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 GEMIN2O14893 280 aaKnown RBP12.42□□□□□ -0.42
SF1-201ENST00000227503 FSTP19883 344 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 CHATP28329 748 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 IL2RGP31785 369 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 OR3A4PP47883 348 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 DHPSP49366 369 aaPredicted RBP12.42□□□□□ -0.42
SF1-201ENST00000227503 HSPB2Q16082 182 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 ABHD5Q8WTS1 349 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 SLC46A1Q96NT5 459 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 CD207Q9UJ71 328 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 ARHGAP21Q5T5U3 1957 aa12.42□□□□□ -0.42
SF1-201ENST00000227503 PRSS37A4D1T9 235 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 SLC33A1O00400 549 aaPredicted RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 CYTIPO60759 359 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 NUDT14O95848 222 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 OR3A2P47893 321 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 TMEM50BP56557 158 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 UBE2KP61086 200 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 KCTD18Q6PI47 426 aaPredicted RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 GLIPR1L1Q6UWM5 242 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 P4HA3Q7Z4N8 544 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 SLC26A10Q8NG04 563 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 ADIPOR1Q96A54 375 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 PACRGQ96M98 296 aaPredicted RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 LPAR5Q9H1C0 372 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 LUZP4Q9P127 313 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 CYP8B1Q9UNU6 501 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 CDC14CA4D256 554 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 FRG2CA6NGY1 282 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 H0YIG0 161 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 BCAT2O15382 392 aaPredicted RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 NUDT21O43809 227 aaKnown RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 APOBEC1P41238 236 aaKnown RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 CSNK2A1P68400 391 aaPredicted RBP12.41□□□□□ -0.42
SF1-201ENST00000227503 TSPO2Q5TGU0 170 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 LRP11Q86VZ4 500 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 CSNK2A3Q8NEV1 391 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 NPRL2Q8WTW4 380 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 OR8D2Q9GZM6 311 aa12.41□□□□□ -0.42
SF1-201ENST00000227503 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.41□□□□□ -0.42
SF1-201ENST00000227503 IGKV1D-8A0A087WSZ0 117 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 IGHV5-51A0A0C4DH38 117 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 LOC390937A0A1W2PQ73 354 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 DEDDO75618 318 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 IGKV3-11P04433 115 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 IL11P20809 199 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 DLK1P80370 383 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 FAM3AP98173 230 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 COMMD2Q86X83 199 aa12.4□□□□□ -0.42
SF1-201ENST00000227503 LIPGQ9Y5X9 500 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms