RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 OR3A2P47893 321 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 KISS1Q15726 138 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 GFOD2Q3B7J2 385 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 H3F3CQ6NXT2 135 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 EMG1Q92979 244 aaKnown RBP21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 ARHGAP5-AS1Q96IT6 56 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 ZNF75AQ96N20 296 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 ANGPTL4Q9BY76 406 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 ZC4H2Q9NQZ6 224 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 DNAJB11Q9UBS4 358 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 OSGIN2Q9Y236 505 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 CSAG2Q9Y5P2 127 aa21.82■■□□□ 1.08
RUNDC3A-201ENST00000225441 DHRS7CA6NNS2 312 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 CDK2AP1O14519 115 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 CTRB1P17538 263 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 OTX1P32242 354 aaPredicted RBP21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 SFTPDP35247 375 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 SSR4P51571 173 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 SUCLG1P53597 346 aaKnown RBP21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 CTRB2Q6GPI1 263 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 PRSS54Q6PEW0 395 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 OR5T2Q8NGG2 359 aa21.81■■□□□ 1.08
RUNDC3A-201ENST00000225441 SLC2A1P11166 492 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 EIF5AP63241 154 aaKnown RBP21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 CSNK2A1P68400 391 aaPredicted RBP21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 STK11Q15831 433 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 SGCAQ16586 387 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 DCAF10Q5QP82 559 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 VASH2Q86V25 355 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 OR51T1Q8NGJ9 327 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 TMEM230Q96A57 120 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 AIFM2Q9BRQ8 373 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 RNF126Q9BV68 326 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 BANF2Q9H503 90 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 C13orf42A0A1B0GVH6 325 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 DNPH1O43598 174 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 RAD51DO75771 328 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 APOC3P02656 99 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 CPT2P23786 658 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 SLC6A9P48067 706 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 DSCR4P56555 118 aaPredicted RBP21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 ATXN7L3Q14CW9 347 aaPredicted RBP21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 FAM74A1Q5RGS3 127 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 CLEC18BQ6UXF7 455 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 BAP18Q8IXM2 172 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 DCUN1D4Q92564 292 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 CPNE2Q96FN4 548 aaPredicted RBP21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 SPACA5Q96QH8 159 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 CHST5Q9GZS9 411 aa21.8■■□□□ 1.08
RUNDC3A-201ENST00000225441 RRP8O43159 456 aaKnown RBP21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 ELP2Q6IA86 826 aa21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 RNF141Q8WVD5 230 aa21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 HAS2Q92819 552 aa21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 THOC3Q96J01 351 aaKnown RBP21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 C2orf50Q96LR7 162 aa21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 RTBDNQ9BSG5 229 aaPredicted RBP21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 MEMO1Q9Y316 297 aa21.79■■□□□ 1.08
RUNDC3A-201ENST00000225441 RAMP1O60894 148 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 PGAM2P15259 253 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 FOXC1Q12948 553 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 ENDOGQ14249 297 aaKnown RBP21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 DRAM2Q6UX65 266 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 BPIFCQ8NFQ6 507 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 PSMF1Q92530 271 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 AQP10Q96PS8 301 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 S100A13Q99584 98 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 SOX7Q9BT81 388 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 OPN1LWP04000 364 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 CD79AP11912 226 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 NPY4RP50391 375 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 RNF144BQ7Z419 303 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 TMEM156Q8N614 296 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 SPTSSAQ969W0 71 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 LYZL4Q96KX0 146 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 FER1L6-AS2Q96M78 137 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 PECRQ9BY49 303 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 SLC6A15Q9H2J7 730 aa21.78■■□□□ 1.08
RUNDC3A-201ENST00000225441 GJE1A6NN92 205 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 TOR1AO14656 332 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 TAAR5O14804 337 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 SMAD9O15198 467 aaKnown RBP21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 DHHO43323 396 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 ZNF84P51523 738 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 SNU13P55769 128 aaKnown RBP21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 BEX5Q5H9J7 111 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 TMEM123Q8N131 208 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 CSNK2A3Q8NEV1 391 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 OR52H1Q8NGJ2 320 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 OR13G1Q8NGZ3 307 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 NABP1Q96AH0 204 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 SF3B5Q9BWJ5 86 aaKnown RBP21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 EDARQ9UNE0 448 aa21.77■■□□□ 1.08
RUNDC3A-201ENST00000225441 NPIPA2E9PIF3 369 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 NPIPA3F8WFD2 350 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 AIMP2Q13155 320 aaKnown RBP21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 ACER2Q5QJU3 275 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 AADACL3Q5VUY0 350 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 LRRC46Q96FV0 321 aa21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 MS4A7Q9GZW8 240 aaPredicted RBP21.76■■□□□ 1.07
RUNDC3A-201ENST00000225441 BLVRBP30043 206 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms