RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 G3V3Q6 166 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 GNG7O60262 68 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 IGHV3-43DP0DP04 118 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 IGFBP6P24592 240 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-201ENST00000220888 CDK5R1Q15078 307 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 ZNF658BQ4V348 819 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-201ENST00000220888 STAC2Q6ZMT1 411 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 SLC24A4Q8NFF2 622 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 OR1L1Q8NH94 360 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 C20orf27Q9GZN8 174 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 DNAJC13O75165 2243 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 LOC102723971A0A1B0GUV8 181 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 LIMS3P0CW19 117 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 LIMS4P0CW20 117 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 CCL2P13500 99 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 ZNF26P17031 533 aaPredicted RBP9.42□□□□□ -0.9
TRPS1-201ENST00000220888 ARNTP27540 789 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 GAMTQ14353 236 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 C3AR1Q16581 482 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 UBE2FQ969M7 185 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 MARC2Q969Z3 335 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 ISL2Q96A47 359 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 DOK1Q99704 481 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 UBE2L5PA0A1B0GUS4 154 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 RAC3P60763 192 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 PRSS36Q5K4E3 855 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 CCDC144NLQ6NUI1 221 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 GLCCI1Q86VQ1 547 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 MARCH1Q8TCQ1 289 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 MRGPRDQ8TDS7 321 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 ZCCHC14Q8WYQ9 949 aaKnown RBP9.42□□□□□ -0.9
TRPS1-201ENST00000220888 SMIM7Q9BQ49 75 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 TREM2Q9NZC2 230 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 LRP12Q9Y561 859 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 MPC1Q9Y5U8 109 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 DLL1O00548 723 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 AREGP15514 252 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 MRPS11P82912 194 aaKnown RBP9.42□□□□□ -0.9
TRPS1-201ENST00000220888 FABP9Q0Z7S8 132 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 DCAF10Q5QP82 559 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 CD276Q5ZPR3 534 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 MOGAT3Q86VF5 341 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 ADGRL4Q9HBW9 690 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 SLC25A19Q9HC21 320 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 OR1A1Q9P1Q5 309 aa9.42□□□□□ -0.9
TRPS1-201ENST00000220888 TOPAZ1Q8N9V7 1692 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 B4GALT3O60512 393 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 HOXD4P09016 255 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 CD200P41217 278 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MLF1P58340 268 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 C1orf185Q5T7R7 199 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MCHR2Q969V1 340 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MYEOVQ96EZ4 313 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 NUDT16L1Q9BRJ7 211 aaKnown RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 FAM103A1Q9BTL3 118 aaKnown RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 C11orf54Q9H0W9 315 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 AUP1Q9Y679 476 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 NKX2-2O95096 273 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 TRAPPC2P0DI81 140 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 TRAPPC2BP0DI82 140 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 PSMB6P28072 239 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 LPAR6P43657 344 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 CDK5Q00535 292 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 GUCA2BQ16661 112 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 KRTCAP3Q53RY4 240 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 TMEM179BQ7Z7N9 219 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 FUNDC1Q8IVP5 155 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 SMRP1Q8NCR6 262 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 OR4A4PQ8NGN8 299 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 OTOSQ8NHW6 89 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 PTP4A1Q93096 173 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 IFITM5A6NNB3 132 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 H3BP45 60 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 FZD6O60353 706 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 DHRS3O75911 302 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MMP7P09237 267 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 CISD3P0C7P0 127 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MPGP29372 298 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 ID1P41134 155 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 TPPP2P59282 170 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 DLEU7Q6UYE1 221 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 FAM122BQ7Z309 247 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 SIGLECL1Q8N7X8 197 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 ZNF764Q96H86 408 aaPredicted RBP9.41□□□□□ -0.9
TRPS1-201ENST00000220888 PCOLCE2Q9UKZ9 415 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 RER1O15258 196 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 SCGB1C2P0DMR2 95 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 CASP3P42574 277 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 PTGFRP43088 359 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 PDCD1Q15116 288 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 MRGPREQ86SM8 312 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 WFDC3Q8IUB2 231 aa9.41□□□□□ -0.9
TRPS1-201ENST00000220888 SLC25A40Q8TBP6 338 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms