RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OR13F1Q8NGS4 319 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 DOK1Q99704 481 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 E9PI62 339 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 NME2P1O60361 137 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 HABP2Q14520 560 aaPredicted RBP12.18□□□□□ -0.46
SIX4-201ENST00000216513 TSPAN32Q96QS1 320 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 SLC25A31Q9H0C2 315 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 RNF7Q9UBF6 113 aa12.18□□□□□ -0.46
SIX4-201ENST00000216513 ZNF230Q9UIE0 474 aaPredicted RBP12.18□□□□□ -0.46
SIX4-201ENST00000216513 SPTBN2O15020 2390 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 FOCADQ5VW36 1801 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 MSTNO14793 375 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 MFGE8Q08431 387 aaPredicted RBP12.17□□□□□ -0.46
SIX4-201ENST00000216513 IL34Q6ZMJ4 242 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 OR6K3Q8NGY3 331 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 C20orf141Q9NUB4 165 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 SCN5AQ14524 2016 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 NAP1L6A6NFF2 107 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 TCRBP04435 133 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 NPBWR1P48145 328 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 MRPS10P82664 201 aaKnown RBP12.17□□□□□ -0.46
SIX4-201ENST00000216513 ERHP84090 104 aaKnown RBP12.17□□□□□ -0.46
SIX4-201ENST00000216513 ZNF658BQ4V348 819 aaPredicted RBP12.17□□□□□ -0.46
SIX4-201ENST00000216513 ADPRHL1Q8NDY3 354 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 OR5H6Q8NGV6 325 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 OR10R2Q8NGX6 335 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 PELI1Q96FA3 418 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 MOGAT1Q96PD6 335 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 MAGT1Q9H0U3 335 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 C19orf12Q9NSK7 152 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 TRAPPC4Q9Y296 219 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 RPS10-NUDT3A0A1W2PQS6 291 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 SCO1O75880 301 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 NGFP01138 241 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 RD3LP0DJH9 198 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
SIX4-201ENST00000216513 HIST2H3PS2Q5TEC6 136 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 GDPGP1Q6ZNW5 385 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 TEX29Q8N6K0 151 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 ADAMTS17Q8TE56 1095 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 PTP4A1Q93096 173 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 WNT2BQ93097 391 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 A0A1W2PQD3 144 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 ZNF17P17021 662 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 GNLYP22749 145 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 PDLIM4P50479 330 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 SVILO95425 2214 aa12.17□□□□□ -0.46
SIX4-201ENST00000216513 LRP5LA4QPB2 252 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 C21orf58P58505 322 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 DGAT2L6Q6ZPD8 337 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 DERL3Q96Q80 235 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 MTCH1Q9NZJ7 389 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 RALYQ9UKM9 306 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 DICER1Q9UPY3 1922 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 ASPDHA6ND91 283 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 OR2F2O95006 317 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 ZNF816Q0VGE8 651 aaPredicted RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 VMA21Q3ZAQ7 101 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 ZBTB44Q8NCP5 570 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 CMTM2Q8TAZ6 248 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 JAM3Q9BX67 310 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 PRSS50Q9UI38 385 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 IGHV3OR16-10A0A075B7F0 116 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 M0R1X1 148 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 MPPED2Q15777 294 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 TMEM182Q6ZP80 229 aaPredicted RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 TIPARPQ7Z3E1 657 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 LYSMD2Q8IV50 215 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 EDARADDQ8WWZ3 215 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 DNASE2O00115 360 aaPredicted RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 HLXQ14774 488 aaPredicted RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 C4orf17Q53FE4 359 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 TSEN54Q7Z6J9 526 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 Q8IYB0 196 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 OR4S1Q8NGB4 309 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 RASL11BQ9BPW5 248 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 SIRT5Q9NXA8 310 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 CTXN2P0C2S0 81 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 RFX2P48378 723 aa12.16□□□□□ -0.46
SIX4-201ENST00000216513 PURGQ9UJV8 347 aaKnown RBP12.16□□□□□ -0.46
SIX4-201ENST00000216513 A0A0J9YW62 118 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 TCRBV5S2A0A599 114 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 AQP7P3A6NL99 342 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 HEXA-AS1Q9H8Q6 139 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 ARPC3O15145 178 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 CRYZL1O95825 349 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 ISL1P61371 349 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 PCOLCEQ15113 449 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 FAM58AQ8N1B3 248 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 NANOGP1Q8N7R0 232 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 SIGLEC12Q96PQ1 595 aa12.15□□□□□ -0.46
SIX4-201ENST00000216513 NKX2-6A6NCS4 301 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms