RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 STRAPQ9Y3F4 350 aaKnown RBP16.78■□□□□ 0.28
MBD3-201ENST00000156825 SERPINE3A8MV23 424 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 E5RGE8 158 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 C3orf80F5H4A9 247 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 FGF9P31371 208 aaPredicted RBP16.78■□□□□ 0.28
MBD3-201ENST00000156825 SLC37A1P57057 533 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 TSEN54Q7Z6J9 526 aaKnown RBP16.78■□□□□ 0.28
MBD3-201ENST00000156825 RXFP4Q8TDU9 374 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 ZNF629Q9UEG4 869 aaPredicted RBP16.78■□□□□ 0.28
MBD3-201ENST00000156825 NSG2Q9Y328 171 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 AQP8O94778 261 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 PTGFRP43088 359 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 SOX8P57073 446 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 HMGN3Q15651 99 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 ADAM19Q9H013 955 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 UMAD1C9J7I0 102 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 PRSS23O95084 383 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 RAB5CP51148 216 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 PLA1AQ53H76 456 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 ARHGEF39Q8N4T4 335 aa16.78■□□□□ 0.28
MBD3-201ENST00000156825 CLEC18AA5D8T8 446 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 ONECUT2O95948 504 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 CRYABP02511 175 aaKnown RBP16.77■□□□□ 0.28
MBD3-201ENST00000156825 UBE2G1P62253 170 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 CLEC18CQ8NCF0 446 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 CCL17Q92583 94 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 SPAARA0A1B0GVQ0 90 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 M0R1X1 148 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 MRM1Q6IN84 353 aaKnown RBP16.77■□□□□ 0.28
MBD3-201ENST00000156825 GVQW1Q8N7I0 195 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 TCFL5Q9UL49 500 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 DTX4Q9Y2E6 619 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 IGHV3-43A0A0B4J1X8 118 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 SERTM1A2A2V5 107 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 IGHV3-43DP0DP04 118 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 RPS4XP62701 263 aaKnown RBP16.77■□□□□ 0.28
MBD3-201ENST00000156825 SLC16A12Q6ZSM3 486 aa16.77■□□□□ 0.28
MBD3-201ENST00000156825 ERRFI1Q9UJM3 462 aaPredicted RBP16.77■□□□□ 0.28
MBD3-201ENST00000156825 UBE2G2P60604 165 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 MRGPREQ86SM8 312 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 FAM96BQ9Y3D0 163 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 SNRPGP15A8MWD9 76 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 DHRS3O75911 302 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 ZBTB25P24278 435 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 CD96P40200 585 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 TMEM128Q5BJH2 165 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 TREM2Q9NZC2 230 aa16.77■□□□□ 0.27
MBD3-201ENST00000156825 RCL1Q9Y2P8 373 aaKnown RBP16.77■□□□□ 0.27
MBD3-201ENST00000156825 CENPVL1A0A0U1RR11 272 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 ZNF727A8MUV8 499 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 C5orf67F2Z3F1 127 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 CYR61O00622 381 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 RNF165Q6ZSG1 346 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 OR2Y1Q8NGV0 311 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 TSTD3H0UI37 97 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 NGFP01138 241 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 PNLIPP16233 465 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 TBPP20226 339 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 TLE1Q04724 770 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 OR2A2Q6IF42 318 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 ACY3Q96HD9 319 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 CNTD2Q9H8S5 307 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 MED19A0JLT2 244 aaPredicted RBP16.76■□□□□ 0.27
MBD3-201ENST00000156825 S100A7P31151 101 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 TMEM88Q6PEY1 159 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 HIST2H3AQ71DI3 136 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 SLC39A7Q92504 469 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 SPSB1Q96BD6 273 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 FAM117AQ9C073 453 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 DOCK3Q8IZD9 2030 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 PEBP1P30086 187 aaKnown RBP16.76■□□□□ 0.27
MBD3-201ENST00000156825 FUT7Q11130 342 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 CDC20Q12834 499 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 MOB3BQ86TA1 216 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 BPIFCQ8NFQ6 507 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 V9GYS6 101 aa16.76■□□□□ 0.27
MBD3-201ENST00000156825 CKAP5Q14008 2032 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 TRGV10A0A0A0MS01 117 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 BTBD17A6NE02 478 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 RPUSD3Q6P087 351 aaKnown RBP16.75■□□□□ 0.27
MBD3-201ENST00000156825 TMEM229BQ8NBD8 167 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 EDARADDQ8WWZ3 215 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 MRM2Q9UI43 246 aaKnown RBP16.75■□□□□ 0.27
MBD3-201ENST00000156825 H7BYZ3 331 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 ZNF205O95201 554 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 OR2B8PP59922 312 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 ERHP84090 104 aaKnown RBP16.75■□□□□ 0.27
MBD3-201ENST00000156825 STUMQ69YW2 141 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 CCL3P10147 92 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 SLC25A6P12236 298 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 AKR1C3P42330 323 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 MAGEA5P43359 124 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 KIAA0141Q14154 515 aaPredicted RBP16.75■□□□□ 0.27
MBD3-201ENST00000156825 MESTQ5EB52 335 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 DTWD2Q8NBA8 298 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 GNPNAT1Q96EK6 184 aaPredicted RBP16.75■□□□□ 0.27
MBD3-201ENST00000156825 ABHD1Q96SE0 405 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 M0R296 226 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 SRD5A2P31213 254 aa16.75■□□□□ 0.27
MBD3-201ENST00000156825 OR5AP2Q8NGF4 316 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms