RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 DHRS2Q13268 280 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 RAB35Q15286 201 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 UBE2V2Q15819 145 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 DMRTC1Q5HYR2 192 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 CLVS2Q5SYC1 327 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 PDSS1Q5T2R2 415 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 ZDHHC22Q8N966 263 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 OR56B1Q8NGI3 324 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 OR52H1Q8NGJ2 320 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 CPT1CQ8TCG5 803 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 MRGPRFQ96AM1 343 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 TMEM38BQ9NVV0 291 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 UBQLN2Q9UHD9 624 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 LINC00862A6NCI5 91 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 CFDP00746 253 aaPredicted RBP13.16□□□□□ -0.3
TRIM3-215ENST00000639856 NAT2P11245 290 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 OR3A3P47888 321 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 SNAI3Q3KNW1 292 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 DRAM2Q6UX65 266 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 TMEM178AQ8NBL3 297 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 FNDC9Q8TBE3 224 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 CST11Q9H112 138 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 OR10A2Q9H208 303 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 ANAPC10Q9UM13 185 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 EFSO43281 561 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 SYNGR3O43761 229 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 NAT1P18440 290 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 SLC10A1Q14973 349 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 PNLIPRP3Q17RR3 467 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 SLC25A42Q86VD7 318 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 FAM89BQ8N5H3 189 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 TNRC6AQ8NDV7 1962 aaKnown RBP13.16□□□□□ -0.3
TRIM3-215ENST00000639856 OR5D18Q8NGL1 313 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 NPRL2Q8WTW4 380 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 MAB21L2Q9Y586 359 aa13.16□□□□□ -0.3
TRIM3-215ENST00000639856 MFNGO00587 321 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 ARPC5O15511 151 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 HLA-AP01891 365 aaKnown RBP13.15□□□□□ -0.3
TRIM3-215ENST00000639856 IFNA6P05013 189 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 GMFBP60983 142 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 RPS27AP62979 156 aaKnown RBP13.15□□□□□ -0.3
TRIM3-215ENST00000639856 SCRN3Q0VDG4 424 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 RIPPLY2Q5TAB7 128 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 C1QL2Q7Z5L3 287 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 OR4K15Q8NH41 348 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 SGK3Q96BR1 496 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 ACKR4Q9NPB9 350 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 LOC100509620A0A075B734 347 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 RPS10-NUDT3A0A1W2PQS6 291 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 OR6C65A6NJZ3 312 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 ZNF891A8MT65 544 aaPredicted RBP13.15□□□□□ -0.3
TRIM3-215ENST00000639856 LEUTXA8MZ59 168 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 CDK2AP1O14519 115 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 B4GALT1P15291 398 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 ESCO2Q56NI9 601 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 CLLU1Q5K131 121 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 THOC7Q6I9Y2 204 aaKnown RBP13.15□□□□□ -0.3
TRIM3-215ENST00000639856 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 ARHGAP5-AS1Q96IT6 56 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 LDAHQ9H6V9 325 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.3
TRIM3-215ENST00000639856 CEP295Q9C0D2 2601 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 MGAQ8IWI9 3026 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 OR2AT4A6NND4 320 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 DHRS7CA6NNS2 312 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 PMP2P02689 132 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 FCGR2AP12318 317 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 ZNF32P17041 273 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 SPINK2P20155 84 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 ZBTB25P24278 435 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 S100A11P31949 105 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 GK2Q14410 553 aaPredicted RBP13.14□□□□□ -0.31
TRIM3-215ENST00000639856 RSPO4Q2I0M5 234 aaPredicted RBP13.14□□□□□ -0.31
TRIM3-215ENST00000639856 CEACAM16Q2WEN9 425 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 SFRP5Q5T4F7 317 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 IGFL2Q6UWQ7 119 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 SLC16A14Q7RTX9 510 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 LYG2Q86SG7 212 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 TUSC5Q8IXB3 177 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 OR51T1Q8NGJ9 327 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 FOXB1Q99853 325 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 OCSTAMPQ9BR26 566 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM3-215ENST00000639856 AUP1Q9Y679 476 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 KCNMB2Q9Y691 235 aa13.14□□□□□ -0.31
TRIM3-215ENST00000639856 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 FXYD6-FXYD2A0A087WZ82 144 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 RAD51DO75771 328 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 WISP2O76076 250 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 SYNGR4O95473 234 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 MGMTP16455 207 aa13.13□□□□□ -0.31
TRIM3-215ENST00000639856 CD34P28906 385 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms