RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 GABARAPL3Q9BY60 117 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 SIRPDQ9H106 197 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 TRIM36Q9NQ86 728 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 TNFRSF19Q9NS68 423 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 H2AFY2Q9P0M6 372 aaPredicted RBP14.65□□□□□ -0.06
PNKP-230ENST00000638016 KAAG1Q9UBP8 84 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 NUFIP1Q9UHK0 495 aaKnown RBP14.65□□□□□ -0.06
PNKP-230ENST00000638016 SLC22A13Q9Y226 551 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 SLC22A31A6NKX4 558 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 ZNF732B4DXR9 585 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 H3BNX3 289 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 NDUFA2O43678 99 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 TOX4O94842 621 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 FCGR1AP12314 374 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 MUC1P15941 1255 aaPredicted RBP14.64□□□□□ -0.07
PNKP-230ENST00000638016 MAP2K3P46734 347 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 KPNB1Q14974 876 aaKnown RBP14.64□□□□□ -0.07
PNKP-230ENST00000638016 ZNF829Q3KNS6 432 aaPredicted RBP14.64□□□□□ -0.07
PNKP-230ENST00000638016 FAM76BQ5HYJ3 339 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 CD276Q5ZPR3 534 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 MOB3CQ70IA8 216 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 UBE2FQ969M7 185 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 CENPNQ96H22 339 aaPredicted RBP14.64□□□□□ -0.07
PNKP-230ENST00000638016 WDFY2Q96P53 400 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 OSBPL10Q9BXB5 764 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 HAO2Q9NYQ3 351 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 PIGLQ9Y2B2 252 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 TMEM14AQ9Y6G1 99 aa14.64□□□□□ -0.07
PNKP-230ENST00000638016 NBEAL1Q6ZS30 2694 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 CENPVL3A0A0U1RRI6 287 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 TMEM210A6NLX4 147 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 ZNF670-ZNF695F2Z2N8 137 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 LOC110117498-PIK3R3F6TDL0 507 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 P2RY10O00398 339 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 ZNF254O75437 659 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 RPP14O95059 124 aaKnown RBP14.63□□□□□ -0.07
PNKP-230ENST00000638016 ODF4Q2M2E3 257 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 GPR157Q5UAW9 335 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 PLCXD3Q63HM9 321 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 BATF2Q8N1L9 274 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 LHX4Q969G2 390 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 ZNF488Q96MN9 340 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 GAFA1Q96PS6 74 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 RAB3IPQ96QF0 476 aaPredicted RBP14.63□□□□□ -0.07
PNKP-230ENST00000638016 OR51I2Q9H344 312 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 ELL3Q9HB65 397 aaPredicted RBP14.63□□□□□ -0.07
PNKP-230ENST00000638016 GPR173Q9NS66 373 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 CLN6Q9NWW5 311 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 DNAJB11Q9UBS4 358 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 RPUSD1Q9UJJ7 312 aaKnown RBP14.63□□□□□ -0.07
PNKP-230ENST00000638016 ZNF391Q9UJN7 358 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 R4GMQ9 66 aa14.63□□□□□ -0.07
PNKP-230ENST00000638016 A0A1W2PQL4 384 aaPredicted RBP14.62□□□□□ -0.07
PNKP-230ENST00000638016 ACOD1A6NK06 481 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 HOXA3O43365 443 aaPredicted RBP14.62□□□□□ -0.07
PNKP-230ENST00000638016 RIPPLY1Q0D2K3 151 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 SNCBQ16143 134 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 DGUOKQ16854 277 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 BCL2L15Q5TBC7 163 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 HAGHLQ6PII5 290 aaPredicted RBP14.62□□□□□ -0.07
PNKP-230ENST00000638016 KRT74Q7RTS7 529 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 THAP5Q7Z6K1 395 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 GID4Q8IVV7 300 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 PNLDC1Q8NA58 520 aaKnown RBP14.62□□□□□ -0.07
PNKP-230ENST00000638016 OR10Z1Q8NGY1 313 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 EME1Q96AY2 570 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 ABCB9Q9NP78 766 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 OR52A1Q9UKL2 312 aa14.62□□□□□ -0.07
PNKP-230ENST00000638016 A0A1B0GTI1 187 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 EI24O14681 340 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 DHRS3O75911 302 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 RNASE1P07998 156 aaKnown RBP14.61□□□□□ -0.07
PNKP-230ENST00000638016 HKR1P10072 659 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 GLRA1P23415 457 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 HTR1FP30939 366 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 MTNR1AP48039 350 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 TGM4P49221 684 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 ACTR3P61158 418 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 GNG3P63215 75 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 CEACAM21Q3KPI0 293 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 METTL11BQ5VVY1 283 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 ZNF788Q6ZQV5 615 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 ELMOD2Q8IZ81 293 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 C3orf56Q8N813 242 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 OR10H4Q8NGA5 316 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 OR14K1Q8NGZ2 314 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 ANGPTL6Q8NI99 470 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 AQP3Q92482 292 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 C12orf43Q96C57 262 aaKnown RBP14.61□□□□□ -0.07
PNKP-230ENST00000638016 HIST1H2AAQ96QV6 131 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 ONECUT1Q9UBC0 465 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 NLKQ9UBE8 527 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 AASSQ9UDR5 926 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 PCDHGB1Q9Y5G3 927 aa14.61□□□□□ -0.07
PNKP-230ENST00000638016 IGKV1D-17A0A075B6S4 117 aa14.6□□□□□ -0.07
PNKP-230ENST00000638016 NDUFB3O43676 98 aa14.6□□□□□ -0.07
PNKP-230ENST00000638016 SYNGR1O43759 233 aa14.6□□□□□ -0.07
PNKP-230ENST00000638016 LIPFP07098 398 aa14.6□□□□□ -0.07
PNKP-230ENST00000638016 EGR3Q06889 387 aa14.6□□□□□ -0.07
PNKP-230ENST00000638016 ZIK1Q3SY52 487 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms