RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ZNF205O95201 554 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 NRASP01111 189 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 IGHV2-5P01817 119 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 IRF2P14316 349 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 CFHR2P36980 270 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 MDH2P40926 338 aaKnown RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 TGM4P49221 684 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 GBX2P52951 348 aaPredicted RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 GABARAPL2P60520 117 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF154Q13106 437 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 ALKBH1Q13686 389 aaKnown RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 BLMHQ13867 455 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 CEACAM21Q3KPI0 293 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 CEP78Q5JTW2 689 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 FAM201AQ5SY85 155 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 CLVS2Q5SYC1 327 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 TMEM244Q5VVB8 128 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF773Q6PK81 442 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 KCTD8Q6ZWB6 473 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 C1orf87Q8N0U7 546 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF485Q8NCK3 441 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 OR5A2Q8NGI9 324 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 HAVCR2Q8TDQ0 301 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 RNF170Q96K19 258 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 HIST1H2AAQ96QV6 131 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 YTHDF1Q9BYJ9 559 aaKnown RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF665Q9H7R5 613 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 RNF7Q9UBF6 113 aa8.17□□□□□ -1.1
LINC00339-210ENST00000635675 EXOSC1Q9Y3B2 195 aaKnown RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 SONP18583 2426 aaKnown RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 FN1P02751 2386 aaKnown RBP8.17□□□□□ -1.1
LINC00339-210ENST00000635675 NIPBLQ6KC79 2804 aaeCLIP8.16□□□□□ -1.1
LINC00339-210ENST00000635675 PPIAL4EA0A075B759 164 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 A6NIN4 97 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 A6NLC8 198 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 TMEM210A6NLX4 147 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 PPIAL4DF5H284 164 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 H3BSH0 61 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 CDIPTO14735 213 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 LMX1BO60663 402 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 ZFPL1O95159 310 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 TGFAP01135 160 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 CCDC159P0C7I6 412 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 PPIAL4FP0DN26 164 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF12P17014 697 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 MYL12AP19105 171 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 C21orf33P30042 268 aaPredicted RBP8.16□□□□□ -1.1
LINC00339-210ENST00000635675 GPM6AP51674 278 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
LINC00339-210ENST00000635675 GNG3P63215 75 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 HOXA4Q00056 320 aaPredicted RBP8.16□□□□□ -1.1
LINC00339-210ENST00000635675 CCDC58Q4VC31 144 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 DMRTC1Q5HYR2 192 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 OR2G6Q5TZ20 316 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 WDR82Q6UXN9 313 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 TMPRSS11AQ6ZMR5 421 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 MOB3CQ70IA8 216 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 MUC20Q8N307 709 aaPredicted RBP8.16□□□□□ -1.1
LINC00339-210ENST00000635675 KLHL36Q8N4N3 616 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 SPICQ8N5J4 248 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 GCSAMQ8N6F7 178 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 LINC01356Q8N9X3 169 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 SCCPDHQ8NBX0 429 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 RPS4Y2Q8TD47 263 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 C10orf35Q96D05 121 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 RAB39BQ96DA2 213 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 GAL3ST1Q99999 423 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 OR51I2Q9H344 312 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 METTL17Q9H7H0 456 aaPredicted RBP8.16□□□□□ -1.1
LINC00339-210ENST00000635675 YAE1D1Q9NRH1 226 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 BABAM2Q9NXR7 383 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 PPIAL4AQ9Y536 164 aa8.16□□□□□ -1.1
LINC00339-210ENST00000635675 PQLC2LA1A4F0 135 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 ANKRD61A6NGH8 418 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 OR5B21A6NL26 309 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 A8MV72 311 aaPredicted RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 B4DSR2 109 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF732B4DXR9 585 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 OGG1O15527 345 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 CDK1P06493 297 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 WNT2P09544 360 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF16P17020 682 aaPredicted RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 SLC35A2P78381 396 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 UBE2V2Q15819 145 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF404Q494X3 552 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 PLCXD3Q63HM9 321 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 XAF1Q6GPH4 301 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 RPL22L1Q6P5R6 122 aaKnown RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 SATL1Q86VE3 508 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 SPARTQ8N0X7 666 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 ZNF676Q8N7Q3 588 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 C19orf18Q8NEA5 215 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 OR51A4Q8NGJ6 313 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 OR10AC1Q8NH08 325 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 OR52N1Q8NH53 320 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 RPL3LQ92901 407 aaKnown RBP8.15□□□□□ -1.1
LINC00339-210ENST00000635675 MYDGFQ969H8 173 aa8.15□□□□□ -1.1
LINC00339-210ENST00000635675 TMIGD2Q96BF3 282 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms