RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 ARR3P36575 388 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 LIMK1P53667 647 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 RAB32Q13637 225 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.39□□□□□ -0.11
GABRB3-215ENST00000622697 UHRF2Q96PU4 802 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 MED9Q9NWA0 146 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 GHRLQ9UBU3 117 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PPP1R2P9O14990 202 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 ADAP1O75689 374 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 TNFSF15O95150 251 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 DEFA6Q01524 100 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 C4orf17Q53FE4 359 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 CXorf67Q86X51 503 aaPredicted RBP14.39□□□□□ -0.11
GABRB3-215ENST00000622697 SLC35G3Q8N808 338 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 PTPMT1Q8WUK0 201 aaPredicted RBP14.39□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF75AQ96N20 296 aa14.39□□□□□ -0.11
GABRB3-215ENST00000622697 HLA-DOBP13765 273 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 NDUFB7P17568 137 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 C9orf62Q8N4C0 152 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 CHAC2Q8WUX2 184 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 KNTC1P50748 2209 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 CDC14BO60729 498 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 MGST1P10620 155 aaKnown RBP14.38□□□□□ -0.11
GABRB3-215ENST00000622697 MLF1P58340 268 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 EXTL1Q92935 676 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 WNK3Q9BYP7 1800 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 PTPRZ1P23471 2315 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-215ENST00000622697 C4orf51C9J302 202 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 FUT6P51993 359 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 EFNB2P52799 333 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 SPICQ8N5J4 248 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 CADM4Q8NFZ8 388 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 RPUSD4Q96CM3 377 aaKnown RBP14.38□□□□□ -0.11
GABRB3-215ENST00000622697 PRSS27Q9BQR3 290 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 TCRBV16S1A1N1A0A5B0 115 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 TNFSF14O43557 240 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 HLA-HP01893 362 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 ACAA2P42765 397 aaKnown RBP14.38□□□□□ -0.11
GABRB3-215ENST00000622697 CLEC9AQ6UXN8 241 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 UQCC2Q9BRT2 126 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 SMOC1Q9H4F8 434 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 GPR160Q9UJ42 338 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF205O95201 554 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 ZIC2O95409 532 aaPredicted RBP14.38□□□□□ -0.11
GABRB3-215ENST00000622697 RPS2P15880 293 aaKnown RBP14.38□□□□□ -0.11
GABRB3-215ENST00000622697 FPR2P25090 351 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 NXPH1P58417 271 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 ZDHHC22Q8N966 263 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 ADPRHL1Q8NDY3 354 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 POLDIP2Q9Y2S7 368 aa14.38□□□□□ -0.11
GABRB3-215ENST00000622697 ZP3P21754 424 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 NANOS3P60323 173 aaKnown RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 SKP2Q13309 424 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 SIGIRRQ6IA17 410 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 MRGPREQ86SM8 312 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 MFRPQ9BY79 579 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 NTMQ9P121 344 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 KLHDC2Q9Y2U9 406 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 FAM96BQ9Y3D0 163 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 C4orf47A7E2U8 309 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF32P17041 273 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 RAB4AP20338 218 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 CATSPERDQ86XM0 798 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 RBMXL3Q8N7X1 1067 aaKnown RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 C10orf90Q96M02 699 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 NXF2Q9GZY0 626 aaKnown RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 DECR2Q9NUI1 292 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 KLF13Q9Y2Y9 288 aaPredicted RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 MTCH2Q9Y6C9 303 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 MPC2O95563 127 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF250P15622 560 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 RPS4XP62701 263 aaKnown RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 FLI1Q01543 452 aaPredicted RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 PLA1AQ53H76 456 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 LYPD8Q6UX82 237 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 OR8B12Q8NGG6 310 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 DAZAP1Q96EP5 407 aaKnown RBP14.37□□□□□ -0.11
GABRB3-215ENST00000622697 ARID2Q68CP9 1835 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 TUBAL3A6NHL2 446 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 OR4C45A6NMZ5 311 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 DHRS3O75911 302 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 RAB1AP62820 205 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 TMEM41BQ5BJD5 291 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 ASB10Q8WXI3 467 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 BORCS7Q96B45 105 aa14.37□□□□□ -0.11
GABRB3-215ENST00000622697 AQP8O94778 261 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 SFTA3P0C7M3 94 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 ACKR3P25106 362 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF816Q0VGE8 651 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-215ENST00000622697 LGALSLQ3ZCW2 172 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-215ENST00000622697 NAA40Q86UY6 237 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 ADGRG3Q86Y34 549 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 FBLIM1Q8WUP2 373 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 PSENENQ9NZ42 101 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 FOXS1O43638 330 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 SCGB2A1O75556 95 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 SSTP61278 116 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 GNPNAT1Q96EK6 184 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-215ENST00000622697 ST6GALNAC2Q9UJ37 374 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms