RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 GDPGP1Q6ZNW5 385 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 FAM58AQ8N1B3 248 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 SYS1Q8N2H4 156 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF709Q8N972 641 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 RNF128Q8TEB7 428 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 CREB3L1Q96BA8 519 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 MRPS24Q96EL2 167 aaKnown RBP7.95□□□□□ -1.14
HDAC9-229ENST00000622668 KIRREL1Q96J84 757 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 GP6Q9HCN6 339 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 COPS3Q9UNS2 423 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 KIR2DS1A0A191URI9 304 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 OR5B21A6NL26 309 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 FFAR1O14842 300 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 BPNT1O95861 308 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 GABRA5P31644 462 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 KIR2DS4P43632 304 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 RPS16P62249 146 aaKnown RBP7.95□□□□□ -1.14
HDAC9-229ENST00000622668 KIR2DS1Q14954 304 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 MDS2Q8NDY4 140 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 OR8D4Q8NGM9 314 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 FAM222BQ8WU58 562 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 JAM3Q9BX67 310 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 FAM53CQ9NYF3 392 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 TAS2R8Q9NYW2 309 aa7.95□□□□□ -1.14
HDAC9-229ENST00000622668 IGHV3OR15-7A0A075B7D8 119 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 ARRDC5A6NEK1 342 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 PRH1P02810 166 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 EPXP11678 715 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 NAAAQ02083 359 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 OR2B11Q5JQS5 317 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 STEAP3Q658P3 488 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 DEGS2Q6QHC5 323 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 Q8IYB0 196 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 OR10J5Q8NHC4 309 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 MARVELD3Q96A59 401 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 SPSB1Q96BD6 273 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 RIMS4Q9H426 269 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-229ENST00000622668 TAS2R5Q9NYW4 299 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 LOC100289279A0A1B0GTE1 492 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 K7EM74 188 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 F2RL2O00254 374 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 SULT1B1O43704 296 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 IFI6P09912 130 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 THBS4P35443 961 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 GPR12P47775 334 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 OR3A4PP47883 348 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 GSK3AP49840 483 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 MVDP53602 400 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF92Q03936 586 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 SWI5Q1ZZU3 235 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 C6orf183Q5T699 404 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 PYHIN1Q6K0P9 492 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 TFAP2EQ6VUC0 442 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 SGPP2Q8IWX5 399 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 RNF150Q9ULK6 438 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 CEBPZOSA8MTT3 80 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 TRAF3IP2O43734 574 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-229ENST00000622668 WISP1O95388 367 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 NGFP01138 241 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 ATF1P18846 271 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 RPL11P62913 178 aaKnown RBP7.94□□□□□ -1.14
HDAC9-229ENST00000622668 CDK5R1Q15078 307 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 WDR38Q5JTN6 314 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 WDR88Q6ZMY6 472 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 OSR2Q8N2R0 312 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 LGALS14Q8TCE9 139 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 RPL3LQ92901 407 aaKnown RBP7.94□□□□□ -1.14
HDAC9-229ENST00000622668 MED30Q96HR3 178 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 HEXA-AS1Q9H8Q6 139 aa7.94□□□□□ -1.14
HDAC9-229ENST00000622668 ZIC2O95409 532 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 EIF4EP06730 217 aaKnown RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 CECR9P0C854 216 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF26P17031 533 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 GNMTQ14749 295 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 ADGRE4PQ86SQ3 457 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 MUC20Q8N307 709 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 C17orf78Q8N4C9 275 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 TCTEX1D2Q8WW35 142 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 DIRC2Q96SL1 478 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 ISG20L2Q9H9L3 353 aaKnown RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 FANCMQ8IYD8 2048 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 CD80P33681 288 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 CCDC58Q4VC31 144 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 FAHD1Q6P587 224 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF517Q6ZMY9 492 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 C20orf196Q8IYI0 205 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 TEX29Q8N6K0 151 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 OR8B12Q8NGG6 310 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 OR51H1Q8NH63 302 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 OR1S1Q8NH92 325 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 LILRB4Q8NHJ6 448 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 PURGQ9UJV8 347 aaKnown RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 AIPO00170 330 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 MGMTP16455 207 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 TIMP3P35625 211 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 ZNF133P52736 654 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-229ENST00000622668 FXNQ16595 210 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 RNFT1Q5M7Z0 435 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 DCAF12L2Q5VW00 463 aa7.93□□□□□ -1.14
HDAC9-229ENST00000622668 CFAP77Q6ZQR2 320 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms