RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 DHRS4L2Q6PKH6 230 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 WDR82Q6UXN9 313 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM179Q6ZVK1 233 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 C9orf40Q8IXQ3 194 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CADM2Q8N3J6 435 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 EID2Q8N6I1 236 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 METTL13Q8N6R0 699 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 OR52N1Q8NH53 320 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CT45A3Q8NHU0 189 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 DOK4Q8TEW6 326 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TCTEX1D2Q8WW35 142 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 MS4A14Q96JA4 679 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 HSFY1Q96LI6 401 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF681Q96N22 645 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 RILPQ96NA2 401 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 MS4A4EQ96PG1 132 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 OR2V2Q96R30 315 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 OR8B4Q96RC9 309 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 FOXC2Q99958 501 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 HOPXQ9BPY8 73 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM109Q9BVC6 243 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CALN1Q9BXU9 219 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 PCBD2Q9H0N5 130 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 PPDPFQ9H3Y8 114 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF385DQ9H6B1 395 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 UBE2ZQ9H832 354 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM27Q9HBJ8 222 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 MEPEQ9NQ76 525 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 CTPS2Q9NRF8 586 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 THUMPD1Q9NXG2 353 aaKnown RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 BTNL2Q9UIR0 455 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF391Q9UJN7 358 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ASF1AQ9Y294 204 aa2.72□□□□□ -1.97
BRCA1-229ENST00000621897 RPL36Q9Y3U8 105 aaKnown RBP2.72□□□□□ -1.97
BRCA1-229ENST00000621897 ERCC6Q03468 1493 aa2.71□□□□□ -1.97
BRCA1-229ENST00000621897 FANCIQ9NVI1 1328 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 VPS37CA5D8V6 355 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 KCNK1O00180 336 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 PSMD12O00232 456 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 DFFAO00273 331 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF593O00488 134 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 PFDN6O15212 129 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 DPM1O60762 260 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 NOS1APO75052 506 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 UGT2B11O75310 529 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GATBO75879 557 aaKnown RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ATP6V1G2O95670 118 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GCGP01275 180 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 RLN2P04090 185 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 CRHP06850 196 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ACSM4P0C7M7 580 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 LIPCP11150 499 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GTF2F2P13984 249 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 KCNE1P15382 129 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 TBPP20226 339 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 PVALBP20472 110 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 PSMA1P25786 263 aaKnown RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 HTR1DP28221 377 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 HRH1P35367 487 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 PTGDSP41222 190 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ACOT2P49753 483 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 HCCSP53701 268 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 CLDN12P56749 244 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 RAB8AP61006 207 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 AP1S1P61966 158 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 FLI1Q01543 452 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 SP4Q02446 784 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 SLC39A6Q13433 755 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 PRPSAP1Q14558 356 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GUSBP1Q15486 140 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 MAPK14Q16539 360 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 FAM120AOSQ5T036 256 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 OR52E8Q6IFG1 317 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 RWDD4Q6NW29 188 aaKnown RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 FAM199XQ6PEV8 388 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 NPSR1Q6W5P4 371 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 IL34Q6ZMJ4 242 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GDPD3Q7L5L3 318 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 MTURNQ8N3F0 131 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 WDR31Q8NA23 367 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 OR10X1Q8NGY0 326 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 OR6K3Q8NGY3 331 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF502Q8TBZ5 544 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 C16orf78Q8WTQ4 265 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 BORCS5Q969J3 196 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 TESCQ96BS2 214 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 SEC22AQ96IW7 307 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ADTRPQ96IZ2 230 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF488Q96MN9 340 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 SORT1Q99523 831 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GPR21Q99679 349 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 GPR22Q99680 433 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 ZNF2Q9BSG1 426 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 CDCA4Q9BXL8 241 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 NXF2Q9GZY0 626 aaKnown RBP2.71□□□□□ -1.98
BRCA1-229ENST00000621897 Q9H3A6 140 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 RBKSQ9H477 322 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 CAB39LQ9H9S4 337 aa2.71□□□□□ -1.98
BRCA1-229ENST00000621897 EXOSC3Q9NQT5 275 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms