RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ISPDA4D126 451 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 TMEM210A6NLX4 147 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 ZNF732B4DXR9 585 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 MT-ND2P03891 347 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 GPM6AP51674 278 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 CHN2P52757 468 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 ZNF154Q13106 437 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 IRF3Q14653 427 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 ZNF181Q2M3W8 571 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 PRSS48Q7RTY5 328 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 C1orf87Q8N0U7 546 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 ZFP41Q8N8Y5 198 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 SMIM19Q96E16 107 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 FGF23Q9GZV9 251 aaPredicted RBP15.65■□□□□ 0.1
CIRBP-245ENST00000621399 RNF7Q9UBF6 113 aa15.65■□□□□ 0.1
CIRBP-245ENST00000621399 hCG_1807616A0A1W2PRN6 198 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 LRP5LA4QPB2 252 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 OR5B21A6NL26 309 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 WNT9BO14905 357 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 GATBO75879 557 aaKnown RBP15.64■□□□□ 0.09
CIRBP-245ENST00000621399 GNG3P63215 75 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 SPHARQ15513 63 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 DMKNQ6E0U4 476 aaPredicted RBP15.64■□□□□ 0.09
CIRBP-245ENST00000621399 ZNF826PQ6ZT77 177 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 C11orf53Q8IXP5 236 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 RPS4Y2Q8TD47 263 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 TSEN15Q8WW01 171 aaKnown RBP15.64■□□□□ 0.09
CIRBP-245ENST00000621399 PP6455Q8WZ26 134 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 GHSRQ92847 366 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 ADAT3Q96EY9 351 aaPredicted RBP15.64■□□□□ 0.09
CIRBP-245ENST00000621399 CHST5Q9GZS9 411 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 SLC7A11Q9UPY5 501 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 DHDHQ9UQ10 334 aa15.64■□□□□ 0.09
CIRBP-245ENST00000621399 PNMA8CA0A1B0GUJ8 204 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 CDIPTO14735 213 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 ZNF205O95201 554 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 BTG1P62324 171 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 MED22Q15528 200 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 UBE2V2Q15819 145 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 FAM76BQ5HYJ3 339 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 BOLLQ8N9W6 283 aaKnown RBP15.63■□□□□ 0.09
CIRBP-245ENST00000621399 GPR148Q8TDV2 347 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 RPL3LQ92901 407 aaKnown RBP15.63■□□□□ 0.09
CIRBP-245ENST00000621399 TECTBQ96PL2 329 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 OR5M11Q96RB7 305 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 YTHDF1Q9BYJ9 559 aaKnown RBP15.63■□□□□ 0.09
CIRBP-245ENST00000621399 TLNRD1Q9H1K6 362 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 ZNF281Q9Y2X9 895 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 LSM2Q9Y333 95 aaKnown RBP15.63■□□□□ 0.09
CIRBP-245ENST00000621399 ACANP16112 2415 aa15.63■□□□□ 0.09
CIRBP-245ENST00000621399 SETD2Q9BYW2 2564 aaPredicted RBP15.62■□□□□ 0.09
CIRBP-245ENST00000621399 ZNF469Q96JG9 3925 aaPredicted RBP15.62■□□□□ 0.09
CIRBP-245ENST00000621399 PPIAL4EA0A075B759 164 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 PPIAL4DF5H284 164 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 IGHV2-70P01814 119 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 PPIAL4FP0DN26 164 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 CELP19835 753 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 GABARAPL2P60520 117 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 BDH1Q02338 343 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 DOC2BQ14184 412 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 ZMYND11Q15326 602 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 SCCPDHQ8NBX0 429 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 CLDND2Q8NHS1 167 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 NPRL2Q8WTW4 380 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 RGP1Q92546 391 aaPredicted RBP15.62■□□□□ 0.09
CIRBP-245ENST00000621399 GAL3ST1Q99999 423 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 OR51I2Q9H344 312 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 METTL17Q9H7H0 456 aaPredicted RBP15.62■□□□□ 0.09
CIRBP-245ENST00000621399 PPIAL4AQ9Y536 164 aa15.62■□□□□ 0.09
CIRBP-245ENST00000621399 CHD3Q12873 2000 aaKnown RBP15.61■□□□□ 0.09
CIRBP-245ENST00000621399 FAM230AA0A1W2PPH8 454 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 PQLC2LA1A4F0 135 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 PLPP2O43688 288 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 HEXAP06865 529 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 OCM2P0CE71 109 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 OCMP0CE72 109 aaPredicted RBP15.61■□□□□ 0.09
CIRBP-245ENST00000621399 MAP2K4P45985 399 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 SOX2P48431 317 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 FUT6P51993 359 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 ACSM1Q08AH1 577 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 CNN3Q15417 329 aaKnown RBP15.61■□□□□ 0.09
CIRBP-245ENST00000621399 TMEM249Q2WGJ8 235 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 FAM201AQ5SY85 155 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 WDR82Q6UXN9 313 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 UTS2BQ765I0 119 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 LRRC28Q86X40 367 aaPredicted RBP15.61■□□□□ 0.09
CIRBP-245ENST00000621399 ZNF573Q86YE8 665 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 SERPINA12Q8IW75 414 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 TRMT10AQ8TBZ6 339 aaKnown RBP15.61■□□□□ 0.09
CIRBP-245ENST00000621399 LRRC29Q8WV35 223 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 SMR3AQ99954 134 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 LRRC42Q9Y546 428 aa15.61■□□□□ 0.09
CIRBP-245ENST00000621399 DYSFO75923 2080 aa15.6■□□□□ 0.09
CIRBP-245ENST00000621399 CD2P06729 351 aa15.6■□□□□ 0.09
CIRBP-245ENST00000621399 HSMCR30P0CW71 290 aa15.6■□□□□ 0.09
CIRBP-245ENST00000621399 ATF1P18846 271 aa15.6■□□□□ 0.09
CIRBP-245ENST00000621399 IL2RGP31785 369 aa15.6■□□□□ 0.09
CIRBP-245ENST00000621399 MDH2P40926 338 aaKnown RBP15.6■□□□□ 0.09
CIRBP-245ENST00000621399 HOXA4Q00056 320 aaPredicted RBP15.6■□□□□ 0.09
CIRBP-245ENST00000621399 YIF1BQ5BJH7 314 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms