RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 EGR3Q06889 387 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 Q6ZRG5 221 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF100Q8IYN0 542 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SOX7Q9BT81 388 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 RCC2Q9P258 522 aaKnown RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 LPAR3Q9UBY5 353 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 MRPS28Q9Y2Q9 187 aaKnown RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 TRBV11-1A0A0K0K1C0 115 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 BLACEA4D250 179 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF705GA8MUZ8 300 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 PIAS2O75928 621 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SYNGR4O95473 234 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 P04436 131 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 HOXC4P09017 264 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 OR13C7P0DN81 318 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 GLB1P16278 677 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 PTAFRP25105 342 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 LTBRP36941 435 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 MTCP1P56278 107 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 NKX6-1P78426 367 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 FZD2Q14332 565 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 BATFQ16520 125 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 CPEB2Q7Z5Q1 589 aaKnown RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ATG4DQ86TL0 474 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM217Q8N7C4 229 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SUMF2Q8NBJ7 301 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 BAHD1Q8TBE0 780 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SPTSSAQ969W0 71 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SEC11CQ9BY50 192 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ULBP2Q9BZM5 246 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 RAB33BQ9H082 229 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 MMP26Q9NRE1 261 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 MED29Q9NX70 200 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SLC5A6Q9Y289 635 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 FREM2Q5SZK8 3169 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 SOCS1O15524 211 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ASAH2BP0C7U1 165 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 FAM157CP0CG43 387 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 IL11P20809 199 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 FOLR3P41439 243 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 SLC25A1P53007 311 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 PHLDA2Q53GA4 152 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 LPCAT3Q6P1A2 487 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 CLEC18BQ6UXF7 455 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 C16orf47Q6ZP98 133 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-216ENST00000620854 C1orf210Q8IVY1 113 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 EXD3Q8N9H8 876 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 OR6S1Q8NH40 331 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 AKR7LQ8NHP1 331 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 FLVCR1-AS1Q8TAF5 88 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 RNF128Q8TEB7 428 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 WWTR1Q9GZV5 400 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 SPACA1Q9HBV2 294 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 SMCO4Q9NRQ5 59 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 CYTL1Q9NRR1 136 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 OR52A1Q9UKL2 312 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 FBXO7Q9Y3I1 522 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF407Q9C0G0 2248 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 TTC28Q96AY4 2481 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 PRSS37A4D1T9 235 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 TXNDC12O95881 172 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 IGHG1P01857 330 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 H2AFB1P0C5Y9 115 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 PPICP45877 212 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ARL6IP1Q15041 203 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF141Q15928 474 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 MICBQ29980 383 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 RSPO4Q2I0M5 234 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-216ENST00000620854 MST1LQ2TV78 715 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ACER2Q5QJU3 275 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 MISPQ8IVT2 679 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 RPS4Y2Q8TD47 263 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ASB17Q8WXJ9 295 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 KIRREL1Q96J84 757 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 ARRDC1-AS1Q9H2J1 176 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 A0A1W2PPE2 198 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 PQLC2LA1A4F0 135 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 YIF1AO95070 293 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 DUS4LO95620 317 aaKnown RBP6.18□□□□□ -1.42
NEDD9-216ENST00000620854 IFNA17P01571 189 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 VSIG8P0DPA2 414 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 GFERP55789 205 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 RIPPLY1Q0D2K3 151 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 MALLQ13021 153 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 UNC119Q13432 240 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 GLIPR1L1Q6UWM5 242 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 CMTM1Q8IZ96 169 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 PAQR4Q8N4S7 273 aaPredicted RBP6.18□□□□□ -1.42
NEDD9-216ENST00000620854 CCDC71LQ8N9Z2 235 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 LRRC75AQ8NAA5 344 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 LRFN5Q96NI6 719 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 CNTNAP3Q9BZ76 1288 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 UNKLQ9H9P5 680 aaKnown RBP6.18□□□□□ -1.42
NEDD9-216ENST00000620854 WASF3Q9UPY6 502 aa6.18□□□□□ -1.42
NEDD9-216ENST00000620854 LILRA5A6NI73 299 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 FGF16O43320 207 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 CD63P08962 238 aa6.17□□□□□ -1.42
NEDD9-216ENST00000620854 EDN3P14138 238 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms