RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 TMEM56Q96MV1 263 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 FGF20Q9NP95 211 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-219ENST00000620786 XKRY2A2RUG3 117 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 SERPINE3A8MV23 424 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 EPPINO95925 133 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 CD3DP04234 171 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 HOXC8P31273 242 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 ZIC1Q15915 447 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 CD276Q5ZPR3 534 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 MRGPREQ86SM8 312 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 SPINT1O43278 529 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 TBX19O60806 448 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 COL13A1Q5TAT6 717 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-219ENST00000620786 RPL7L1Q6DKI1 246 aaKnown RBP10.15□□□□□ -0.79
CLIP1-219ENST00000620786 OR4Q3Q8NH05 313 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 ST8SIA2Q92186 375 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 WDR34Q96EX3 536 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 LRFN3Q9BTN0 628 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 CYSLTR2Q9NS75 346 aa10.15□□□□□ -0.79
CLIP1-219ENST00000620786 ABCA3Q99758 1704 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 DNASE2O00115 360 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 MDH2P40926 338 aaKnown RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 PCBP3P57721 371 aaKnown RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 ISXQ2M1V0 245 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 DCAF10Q5QP82 559 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 LCN15Q6UWW0 184 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF441Q8N8Z8 693 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 GNPNAT1Q96EK6 184 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 C20orf141Q9NUB4 165 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 PSG11Q9UQ72 335 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 IGHV3-43A0A0B4J1X8 118 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF724A8MTY0 619 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 IGHV3-43DP0DP04 118 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 RAB7AP51149 207 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 GP2P55259 537 aaKnown RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 TIGITQ495A1 244 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 OR4S1Q8NGB4 309 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 OR5B3Q8NH48 314 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 DPF1Q92782 380 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 SIGLEC7Q9Y286 467 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 TRAV38-1A0A0B4J264 116 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 CLEC18AA5D8T8 446 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 TAAR5O14804 337 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF141Q15928 474 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 TMPRSS11FQ6ZWK6 438 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 LYSMD2Q8IV50 215 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 CLEC18CQ8NCF0 446 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 LFNGQ8NES3 379 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 OR2M7Q8NG81 312 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 HMGCLL1Q8TB92 370 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 ASB5Q8WWX0 329 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 LOXL4Q96JB6 756 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 UCK1Q9HA47 277 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 RCL1Q9Y2P8 373 aaKnown RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 GPR31O00270 319 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 FCGR3BO75015 233 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 OR2F2O95006 317 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 IGFBP7Q16270 282 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 MOB1BQ7L9L4 216 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 C20orf196Q8IYI0 205 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 OR52N4Q8NGI2 321 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 RTN4IP1Q8WWV3 396 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-219ENST00000620786 F2RL2O00254 374 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 RAC3P60763 192 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 ACSM6Q6P461 480 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 NHLRC1Q6VVB1 395 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 SLC7A5P1Q8MH63 180 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 RFESDQ8TAC1 157 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 PIK3IP1Q96FE7 263 aa10.14□□□□□ -0.79
CLIP1-219ENST00000620786 E5RGE8 158 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 MBP02144 154 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 OR8U1Q8NH10 309 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 EID2BQ96D98 161 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 NRTNQ99748 197 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 NSG2Q9Y328 171 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 ADAMTSL1Q8N6G6 1762 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 SLC31A2O15432 143 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 CD1EP15812 388 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 OPRK1P41145 380 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 BTG1P62324 171 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 EXOSC2Q13868 293 aaKnown RBP10.13□□□□□ -0.79
CLIP1-219ENST00000620786 KISS1Q15726 138 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 ASB10Q8WXI3 467 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 SLC6A13Q9NSD5 602 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 PLEKHB1Q9UF11 243 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-219ENST00000620786 GAB2Q9UQC2 676 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 HRASP01112 189 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 MT-ND4LP03901 98 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 COX5AP20674 150 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 HAGHQ16775 308 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 WDR38Q5JTN6 314 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 RNF24Q9Y225 148 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 SHROOM3Q8TF72 1996 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 OR2M5A3KFT3 312 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 ZNF354AO60765 605 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-219ENST00000620786 CCL3P10147 92 aa10.13□□□□□ -0.79
CLIP1-219ENST00000620786 AKR1C3P42330 323 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms