RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 ANGPTL5Q86XS5 388 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 STX12Q86Y82 276 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF561Q8N587 486 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 OR13C8Q8NGS7 320 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 OR6S1Q8NH40 331 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 TERB2Q8NHR7 220 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF721Q8TF20 911 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 HS3ST6Q96QI5 342 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 NRIP2Q9BQI9 281 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ST6GALNAC5Q9BVH7 336 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 SMIM3Q9BZL3 60 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 NMES1Q9C002 83 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CARHSP1Q9Y2V2 147 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 MRPS18BQ9Y676 258 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 PCNX2A6NKB5 2137 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 IGKV1D-42A0A075B6H8 117 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 PRR33A8MZF0 331 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CRTAPO75718 401 aaPredicted RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ACTL6AO96019 429 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ASAH2BP0C7U1 165 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 NFYBP25208 207 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF93P35789 620 aaPredicted RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 EFNA3P52797 238 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 F2RL1P55085 397 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 DCAF7P61962 342 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 MFGE8Q08431 387 aaPredicted RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CD226Q15762 336 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CSRP2Q16527 193 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 SGCBQ16585 318 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CPEB2Q7Z5Q1 589 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 FNDC9Q8TBE3 224 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF251Q9BRH9 671 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 PBDC1Q9BVG4 233 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 DEFB126Q9BYW3 111 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ACKR4Q9NPB9 350 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF701Q9NV72 531 aaPredicted RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 LSM5Q9Y4Y9 91 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 OTOGLQ3ZCN5 2332 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 TP53BP1Q12888 1972 aaPredicted RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 MT-CO3P00414 261 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 IFNA17P01571 189 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 IGKV3-11P04433 115 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 GUSBP08236 651 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 PI3P19957 117 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 S100PP25815 95 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 PTGFRP43088 359 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 GLP1RP43220 463 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 DAP3P51398 398 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 CEBPGP53567 150 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 MOGAT2Q3SYC2 334 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 PRSS54Q6PEW0 395 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 DBX2Q6ZNG2 339 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 Q6ZRG5 221 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 DNM1P46Q6ZS02 220 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 C15orf54Q8N8G6 183 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 ADAD2Q8NCV1 583 aaKnown RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 SLC30A7Q8NEW0 376 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 TMEM234Q8WY98 164 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 MAFIPQ8WZ33 124 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 TMEM59Q9BXS4 323 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 WWTR1Q9GZV5 400 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 TXNIPQ9H3M7 391 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 RAB18Q9NP72 206 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 KCNJ16Q9NPI9 418 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 FAM212BQ9NTI7 297 aaPredicted RBP6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 DCAF16Q9NXF7 216 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 EHFQ9NZC4 300 aa6.19□□□□□ -1.42
SRGAP3-213ENST00000618999 TMED7-TICAM2A0A0A6YYA0 188 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 TO15178 435 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FSTP19883 344 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 TCN2P20062 427 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 AKR1C3P42330 323 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 CAV2P51636 162 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 POLR2HP52434 150 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 TRIP6Q15654 476 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ABCA11PQ4W5N1 156 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FDX2Q6P4F2 183 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ZNF813Q6ZN06 617 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 LIAT1Q6ZQX7 453 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 C9orf40Q8IXQ3 194 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KCNG3Q8TAE7 436 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 AKR1E2Q96JD6 320 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 LAT2Q9GZY6 243 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 BARX1Q9HBU1 254 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 SLC2A8Q9NY64 477 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 NXT1Q9UKK6 140 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 MRPS28Q9Y2Q9 187 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FLVCR1Q9Y5Y0 555 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 KIF26BQ2KJY2 2108 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 FRG2CA6NGY1 282 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 A8MVM7 634 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 PNPP00491 289 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 CTLA4P16410 223 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 ABCD3P28288 659 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 OTX2P32243 289 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 TAS2R46P59540 309 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 RNF4P78317 190 aa6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 RPP30P78346 268 aaKnown RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 INSM1Q01101 510 aaPredicted RBP6.18□□□□□ -1.42
SRGAP3-213ENST00000618999 IAH1Q2TAA2 248 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms