RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 TP53I3Q53FA7 332 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 KLHL22Q53GT1 634 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 FAM201AQ5SY85 155 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 ATPAF1Q5TC12 328 aaPredicted RBP6.89□□□□□ -1.31
NEK3-209ENST00000618856 DCDC5Q6ZRR9 648 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 C1orf229Q6ZS94 237 aaPredicted RBP6.89□□□□□ -1.31
NEK3-209ENST00000618856 ZNF826PQ6ZT77 177 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 GLCCI1Q86VQ1 547 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 ZDHHC23Q8IYP9 409 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 ZNF485Q8NCK3 441 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 SETD9Q8NE22 299 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 OR2G2Q8NGZ5 317 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 OR8S1Q8NH09 359 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 C12orf43Q96C57 262 aaKnown RBP6.89□□□□□ -1.31
NEK3-209ENST00000618856 RTL8AQ9BWD3 113 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 PAPOLGQ9BWT3 736 aaKnown RBP6.89□□□□□ -1.31
NEK3-209ENST00000618856 TMPRSS13Q9BYE2 586 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 AMBNQ9NP70 447 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 TRIM36Q9NQ86 728 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 PLCXD1Q9NUJ7 323 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 UFSP2Q9NUQ7 469 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 KAAG1Q9UBP8 84 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 MIOXQ9UGB7 285 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 OPN4Q9UHM6 478 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 ENPP5Q9UJA9 477 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 PIGLQ9Y2B2 252 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 LRCH1Q9Y2L9 728 aa6.89□□□□□ -1.31
NEK3-209ENST00000618856 PQLC2LA1A4F0 135 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 ISPDA4D126 451 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 OOEPA6NGQ2 149 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 ANXA2P2A6NMY6 339 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 CDIPTO14735 213 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 NOS1APO75052 506 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 RPP14O95059 124 aaKnown RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 ZNF205O95201 554 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 AVPP01185 164 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 GNAO1P09471 354 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 PIPP12273 146 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 MUC1P15941 1255 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 FAHP16930 419 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 ZNF12P17014 697 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 AMY2BP19961 511 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 MPZP25189 248 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 DCKP27707 260 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 TGM4P49221 684 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 GNG3P63215 75 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 CSNK2BP67870 215 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 RIPK1Q13546 671 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 CLVS2Q5SYC1 327 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 LYPD2Q6UXB3 125 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 FAM220AQ7Z4H9 259 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 LHFPL3Q86UP9 236 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 FAM90A1Q86YD7 464 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 SCCPDHQ8NBX0 429 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 DEFB108BQ8NET1 73 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 CNIH3Q8TBE1 160 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 HAVCR2Q8TDQ0 301 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 PIGCQ92535 297 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 NEIL1Q96FI4 390 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 RNF170Q96K19 258 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 FAM71F1Q96KD3 344 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 C4orf36Q96KX1 117 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 MYCBPQ99417 103 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 ALG8Q9BVK2 526 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 SHARPINQ9H0F6 387 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 METTL17Q9H7H0 456 aaPredicted RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 ISG20L2Q9H9L3 353 aaKnown RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 FKBP14Q9NWM8 211 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 CTSZQ9UBR2 303 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
NEK3-209ENST00000618856 DIMT1Q9UNQ2 313 aaKnown RBP6.88□□□□□ -1.31
NEK3-209ENST00000618856 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 TRAV38-1A0A0B4J264 116 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 A0A0G2JMP0 313 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 A0A0X1KG70 313 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 LOC107986453A0A1B0GWG9 222 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 IRGMA1A4Y4 181 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 ERICH4A6NGS2 130 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 ZNF732B4DXR9 585 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 E9PI62 339 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 SYT7O43581 403 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 NRASP01111 189 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 RPSAP08865 295 aaKnown RBP6.87□□□□□ -1.31
NEK3-209ENST00000618856 PPIAL4GP0DN37 164 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 NPY4RP50391 375 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 LCN2P80188 198 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 PAX8Q06710 450 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 ALKBH1Q13686 389 aaKnown RBP6.87□□□□□ -1.31
NEK3-209ENST00000618856 UBE2V2Q15819 145 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 KCNJ8Q15842 424 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 CEP78Q5JTW2 689 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 TMEM244Q5VVB8 128 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 RNLSQ5VYX0 342 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 WDR25Q64LD2 544 aaPredicted RBP6.87□□□□□ -1.31
NEK3-209ENST00000618856 STUMQ69YW2 141 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 UTS2BQ765I0 119 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 THAP5Q7Z6K1 395 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 RDH10Q8IZV5 341 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 OR4M2Q8NGB6 313 aa6.87□□□□□ -1.31
NEK3-209ENST00000618856 LRRC29Q8WV35 223 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms